Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06269 ATGGATGAGATTTCGTCTTCCACAAATGTCACTCAAGATGTTGGTTCAATCTCCGATGAAAATAAAGAATCGTGGCAACATTTTGTCTTCCACGACCTTTCATCAATCAAGGATTTCTATGCTAAATACGCTCATGAAAAGGGATTTAGCATGAGAAGAAATTTGCACTCCTTATTTGATTCTCGTAACAAAAAAACGGACATTGTGCAATATATCCGTTATGTTTGTAACAAGCATGGTTTCAAGCACGGAAGTCGGGCGGATCCTAAGAACAAGACAAACTCGGATACTCCTGTTCTCATTGAATATCAGAAAGAGAAAGAACTTCCTGAGGAAAGGATTGGTTGCCCAGCTAGTATTTCGTTGAAGTATGATTCCAATGTTAAAGGTTATCACATATACAAATGGAATGTTACTCATAACCATCCTCTCCATAAACCCGAGCATTCGCATTACTTGAGATCGGCTCGAGAGATTAGTGAGCCTAAAAAACAACTTGCTATAATAAATTCAAAATCAGGCATGTCTGTAAGATCCTCCTTTCAAGTTATGCATCAAATAGCTGGTGGTTCAAAGAACCTTGGGTATTGCTTCCAAGATTTAAAGAACTTTCTCACCACTGTTCGACAAAAGGAAATGGTCATTGGTGATGCAACTATTATCCAAGAATATCTTAGAAACGAAGCTTTGAGGAACCCATCATTTTATTATGATATCCGAGTAGATTCTGAAGAGAACATAGCTAGTATTTTCTGGTCAGATGCAATCATGCAGCAAGAGTATGAATTATTTGGTGATCTCATCAGTTTCGACACAACTTATCGAACAAATACGGAGTATCACCCATTAGCTCTGTTCCTTGGATTTGACAACCACCGTAAGAGTGTATTATTTGGTTGTGCCCTGCTCTACGATGAGACTTCAGCAAGTTTTGATTGGTTGTTTACGACTTTCCTGAAGTGCATGAAAAATAAGAAACCCATTACAATTTTTACAGACCAAGCTTCTGCTTTGATGAAGTCAGTTCCAAACATCTTTCCCGATGTCTTCCATGGGTTGTGTTCTTGGCACATGGGGGAGAATGCAAAGTCCAACTTAGGCTCTCGTTGCAATGGTGCATTTCTTGACGAACTACATCACTTGGTTTCGAATGTTGATGATGAGGCAAAGTTTGACTTCAATTAG 1185 0.3882 MDEISSSTNVTQDVGSISDENKESWQHFVFHDLSSIKDFYAKYAHEKGFSMRRNLHSLFDSRNKKTDIVQYIRYVCNKHGFKHGSRADPKNKTNSDTPVLIEYQKEKELPEERIGCPASISLKYDSNVKGYHIYKWNVTHNHPLHKPEHSHYLRSAREISEPKKQLAIINSKSGMSVRSSFQVMHQIAGGSKNLGYCFQDLKNFLTTVRQKEMVIGDATIIQEYLRNEALRNPSFYYDIRVDSEENIASIFWSDAIMQQEYELFGDLISFDTTYRTNTEYHPLALFLGFDNHRKSVLFGCALLYDETSASFDWLFTTFLKCMKNKKPITIFTDQASALMKSVPNIFPDVFHGLCSWHMGENAKSNLGSRCNGAFLDELHHLVSNVDDEAKFDFN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06269 394 Pfam MULE transposase domain 268 359 IPR018289 -
Vivi3g06269 394 PANTHER OS01G0519700 PROTEIN 16 382 - -
Vivi3g06269 394 Pfam FAR1 DNA-binding domain 38 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06269 Vivi-Chr3 164924840 164926256 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g06269 FAR1 5.7e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06269 - - vvo:131652168 672.159