Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06266 ATGGATTCTCTCAAAATTTTCAAAGGCTACGACAAAGTTGAAACCAACCTCGAAGATCAACAAACACAGCAACAGCATCGCCACGAAATCTCCAAACCCCTCATCGCCACAATTTCCATCATCATCATCACCATCTTCTTCCTAACCCTCACTTTATCCTTCACCCTCTTCTTCCACCACACCGACTCACAAACCCCCCTCAAATCAGCCAACTCAATCAGATCCATTTGCAACGTAACTCGCTTCCCCGACTCATGCTTCACCGCTCTATCTCCCTCCTCAGAAAACCTCACCAACCCAAACTCCATCCTCAAACTCTCCATCCTCGCCTCCGTCGCCGAACTCTCCAAACTCAATCTCGCTTCATCGCTAAAAGCCGATTCCGACAAACGCGCGCTCGATGATTGCAAGGAACTAATAAACAACGCGGTGAGTCGACTCAACGAGTCTGTTTCGACGGTTCCTGACGGTGCCGTTACGTTGACGGAGGGGAAAATTAAAGATATTCAGACGTGGGTTAGTGCCGCGTTGACGGATCAACAAACGTGCGTTGATGGGATAGAAGAAGTTGGGGTTTCTTTGGATACCCTTGAAAAGGTAAAGAAAATGATGCAGAAATCAAATGAGTATACCAGCAATAGTTTGGCTATTGTGGCTAATATAAACAATTTGTTACCAATTCACTAA 687 0.46 MDSLKIFKGYDKVETNLEDQQTQQQHRHEISKPLIATISIIIITIFFLTLTLSFTLFFHHTDSQTPLKSANSIRSICNVTRFPDSCFTALSPSSENLTNPNSILKLSILASVAELSKLNLASSLKADSDKRALDDCKELINNAVSRLNESVSTVPDGAVTLTEGKIKDIQTWVSAALTDQQTCVDGIEEVGVSLDTLEKVKKMMQKSNEYTSNSLAIVANINNLLPIH 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06266 228 CDD PMEI-like_3 75 221 - -
Vivi3g06266 228 PANTHER PECTINESTERASE INHIBITOR-LIKE 44 217 - -
Vivi3g06266 228 NCBIfam pectinesterase inhibitor domain 45 220 IPR006501 GO:0004857
Vivi3g06266 228 Pfam Plant invertase/pectin methylesterase inhibitor 72 217 IPR006501 GO:0004857
Vivi3g06266 228 SMART PMEI_2 68 217 IPR006501 GO:0004857
Vivi3g06266 228 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 221 IPR035513 -
Vivi3g06266 228 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 222 IPR035513 -
Vivi3g06266 228 FunFam Pectinesterase 69 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06266 Vivi-Chr3 164877455 164878316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06266 1 228 Carbohydrate Esterase AT1G53840 34.387 1.26e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06266 - - gmx:100789567 189.504