Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06189 ATGGCCATTGAAACAAAGCATGTGGTGGTGATACAGGATGCATCTAAACTAAATTTTAAAGTATTTTCTTGGGTTATAAATGGCTTATCACTTAAGGAAGGAGATATGGTCACCTTACTTGCAATCTTGCATGAGGTTTACAATCCTATGGGTTATAAAAGCAAGATGGACAACAATGGACTGGTTGGAGTAAACCAGCGAATCATTGAGGGAGAACTTGCAAGGAAGAAGGAAGAGTATTTGAACCATGAGGAGCTTGCAAAGATCGCTAAAGTGTATGACTCAAATGAGGTTGCATTTAAGATACAGTTGTATGCAGGATCTTCACCAAAACATTTTGCTATAGAAGGTGCCTTAAACCTAAAGGCAACTTGGGTGATACTTGACAGGCAAATGAAGAAAGATGAAGAGTTTTTCACACAGAAGCTTTCATGTGGAATATCTAGAATACTAGGTAAAAATCACATAGAACGCATAAGAGGACCTATAGATCTCGCAGTGGAAATACAATGCAACAGTCATGAAACATATCCTGAAAGTTTACCAGAAAGTCCACGCGAAGATGTTTCCAACGATCGTCCAATCAATGTTGAAGAGACGAGCCAGATAAATTTTAGGCCCGATAAGGATGAGGGATGCTCAACAATCATTCCTAGCATGGATGAAACTGATATAAGCAGTAACAAAATCATAGACAAAGATGCAGAACATATAGAAAAAATGGCTTACGAGGATGATATCGACACAACCCATATGACTAACAATGATCAAACAAAAGATCTTCCTATGAGCCAGGATCAAAGAAAAAATGCCTCAGCGTGTTCTATATGCTCTGTCTGCAAAACTAGAAGGCCTAATATTGAATGGCTAAAGGAATTTACTTATGAAGAAGTGGAAGCAGCAACAGATGGATTTTCATTGAAGAACTGTCTCTCTGAAAGTGGAAATCCATTCTCCACTTTCAAAGGCAAGCTGGAGGGAGAGCTGAAAATAGTCGTTAAGCAGCATGAAATAACAAACATTCAAGTAAGGGAAAAAATGATATCAGAAGTTCAAACCATCGTCAAAGCTAGACATAACAACGTGGTTATGCTATTGGGTTCATCTACAAAAGATCGTTTCATGTTGATTGTATACGAGTATGCATGCAACGGTTCACTAGACATGTATCTATCAAGGGAAAGCTGCAAAAAATTGACCTGGAGTGAAAGGCTGAGAGTGGCAATAGGCCTCTCCAGAGGTCTAAAGTACCTACACGACAATAACATTATTCATGGAAATATAAAACCGAGCAATATTCTTCTAGCACATGACCTCAAACCACTGCTTGGAGATTTTGACCTCGGGAAAAAACTCGAACCGAAGAAGTCCTTCAATAACAAAAGCATAGGGAATTCTGAATACACGGCACCAGAGTATCAGGAAAAGGGAAAACTGTCAACTAAAACAGATGTATACTCGTTTGGTGTGGTTATTTTAGAGTTGATTACAGGACGCAAAGCCACGGATAAAATATCAGGAGAAAAAAGACTTGTCGGATGGGCAAAGCCTCTTCTAGGAGGAAAGAAGTATTCAGAGTTGGTGGATCCTATAATAAGCAACACATATGAAGAAGACCAACTTCGCTGGTTGGTTAAAGTTACAGCACAGTGTCTCAAAAAGAAGCCTAAGGAAAGATTATCCATGAACATGGTTGTTTCTGCATTACAAGGCATTGTAGATAGCGAACAAAGCAATATTACAGAAGACTTAACTTTAGCTACATCAGATTCTAGAATTGGGTCTGATATTGATGGTTCACAAGTTACATTACAAGGCATAACAGACAGAAAACAGTGCAACATGACAGAGGATATTCCTCAAGTTGTATCAAATTCAAGAGAACTAGATCTCCTGAGTCCGAAAGCGGAGCAGATAGAAAGAATCTCTTTGGAGGAGGAAAGTTGTTTAAGAATAAAAGTTGAAGACAATCAATTTTACACAACAGGCCAGAAAAGCTCTGATATATTGAGCCAGATTGATGAACAGATGCAGAACATGCCACAAAGGTTGGATTTAGGAAACATGATAATAAATCAACATATGATGGATCAGACAATAGCTGCTGAGATGAGTGATTCTGAACAAAATTTGAAGAGCAACCACAACGAGAATGGCGTTCTAGCACAGAAAATTAGTAATAACCGCGTGATTGGTCATGATCAAGAAGACGAGACGAGCTTTGTTCAAATGAAAAGAGGCTTACAACCTGTACCTATTAGTGGAATAGTACTTCAAACACAACTTCAGACTAGCTTCACTGAGAGTTTACGTGATAAAAATCAAGATGGAATCATTTTAGAGAAATCAAAATCCTCCGCGTGCTCTATTTGCAAAAGTAAACGACCAAAAATTGTACGGATGAAAGACTTTACTTGTGACGAACTCGTAGAAGCTACTAAAGGATTTTCAGTTGAGAACTCTCTATCAGAAAGTGAGGATGGACCTACTTTCAAAGGGCTTCTAGAAAATAAGGTTAAAATAGTTGTTAAGAAACATCAAATGACTAGGTCGCAGGAAGAGAAGACATTCAAGTCAGAAGTCCAGTTGTTCACCAAAGTTAGACACAAAAATGTGGTCATGCTGTTAGGATTGTGTACAGATGAAAGTCAATTGATGATTGTATATGAGCAAGTATGCAATGGTTCTCTTGACCATTACCTATCAAGGGGAAATTTCCAGTCATTGACATGGAAGGAAAGAATGAAAATATCAATAGGTACTGGTAGAGGTTTAAAGTATCTACACGAGAATAAGATAATTCATGGAAGTATAAAAGCAAGTAACATTCTTCTAACACATGACTTTGAACCGCTGATTGGAGATTTCGGCTTTGGAAAAGTGAAACTGGAACCAAAGAAGTCCTACAAAGATAAAAGTGGACGAGATTTTGGATATGCAGCACCTGAGTATTTGGAGAATGGGAAATTATCAACTAAAACAGATGTGTACTCCTTTGGAGTGGTTCTTTTAGAACTGATTACCGGCCGGAGGGCAATGGACAAGTTACAGGGAGGCAAAAACCTGGTTGGATGGGCAAAGCCACTGCTGGGAGGAAAGAAGTATCCACAGTTAGTGGATTCAAAAATCAGTAACACATATGAAGAAGAGCAACTTCAATGGTTGGTCCAAGTAACAGAAAAATGTCTCAAAAAGAATCCCAAGGAAAGATATTCAATGAATATGGTTGTATCTGCATTACAAGGCATAACAGAATCAGATGACTGTTGTTTAATTGAAGATTCTTCTTCTTCAGAAAAATCATATTTACCAAATGATGAGCCGGTCATTCCCATGACTAATTCACATGGTCATACGATGGCTGATCCGGTAAGCTGGGAAGCAGAACCGCTTGGCAGAAACACATGCAATGCAGAGACAAGCTTCATAACAGCAATTACAACTAACAACATGATTGAACAGATCAAGGAAAATCAACACAAAAAAGAAAGCTTCCACATAGAAGAGAATGATATAGAGAAAAAAGAAGTAAATAAACAACAAAAGATAAACCTGGATGAAAAAGTAATCCAAGACAGCTATGAAAATGAGGGCTTATTGAGTGAGAATCAAGGAGAAACCATTTTGGAGAGTATTTCAAAGTCTTCTGTATGCTCCATCTGCAAAAGTAGACGCCCAAATAATGAGTGGCAAAGGAAATTTACTTATGAAGAAATTCAAGCAGCTACAGAAGGATTTTCAATTAAGTATTCTCTATCTGAAGGTGCATATGGACCTGCCTTCAAAGTTCAGCTGGATGATAAGATGAAAGTAGCTATTAAGAAAATTCAAGTCTCAAGCTTGCAGGAAGAGAAGGTGTTTGTGTCGGAAATTCAGTTGCTCGCAAATACTAGACATGAAAACATCATCATGCTTCTTGGTTCATGTATACGACAAAACCAATTGTTGATCGTATATGAATACTCATGCAACGGTTCGCTTGACCATTACTTATCAAGCAAAAGTGGTAGACTATTGACTTGGAGAGAAAGGATGAAAATTGCTACAGGAGTATCGAGAGGTCTGAAGTTTCTACATGAGAATAACATAATACATGGAAGAGTAAAACCAAGTAACATTCTTCTAAATCACGACTATAAGCCATTGGTTGGAGATTTTGTGTTTCCAAAAGAAAGACGGGAATCAAAGAATAGCTGCAAGGATAAAAGGGTTAGAAATTGTGGATACATTGCCCCGGAGTGTAAGGAGAGTGGAAAAGTATCGACAAAGGCGGATGTTTACTCTTTTGGTGTAATTCTTTTAGAATTGATCACAGGATGTATGGTATCAGATAAGATACAAGGGCAGAAATGCCTTGTGGAATGGGCAAGGCCACTACTAGGAGGAAAGGAGTACCTAGAATTGATGGATCCCGAAATCAGCAGCTCGTACGATGAAGAGGAACTTGCTTCATTGGTCCTAGTATCAGAAAAGTGCCTCAGAAAGAACCCCAAGGAAAGGTTTACAATGAATATGGTTGTCTCGTTAATGCCATCTGTAGTTGATATCAATGACATTAATGCAATTGAAGACTCTTCATCAGAAAAGTCAGATGAATTATACTGTGTTTCAGATGTAAGAAGCTCAGAAATTGAGGAGGTAGGAGAAGAAGAAGGTTTAGGCAGAAGTGAAGAAAGAGAAAACAACATAAGATGTAGTAACGGAAATTGCATGGAAACAAAGGAAAAAGAAAGGTGTGAATCTTATGGTGGAGCTAGACACTTTTTCCTAGATGGTGGTAAAGAATATATAGCATGTGAAGAATTATTTAGCTTGTGTAATTCGATTTGA 4830 0.3807 MAIETKHVVVIQDASKLNFKVFSWVINGLSLKEGDMVTLLAILHEVYNPMGYKSKMDNNGLVGVNQRIIEGELARKKEEYLNHEELAKIAKVYDSNEVAFKIQLYAGSSPKHFAIEGALNLKATWVILDRQMKKDEEFFTQKLSCGISRILGKNHIERIRGPIDLAVEIQCNSHETYPESLPESPREDVSNDRPINVEETSQINFRPDKDEGCSTIIPSMDETDISSNKIIDKDAEHIEKMAYEDDIDTTHMTNNDQTKDLPMSQDQRKNASACSICSVCKTRRPNIEWLKEFTYEEVEAATDGFSLKNCLSESGNPFSTFKGKLEGELKIVVKQHEITNIQVREKMISEVQTIVKARHNNVVMLLGSSTKDRFMLIVYEYACNGSLDMYLSRESCKKLTWSERLRVAIGLSRGLKYLHDNNIIHGNIKPSNILLAHDLKPLLGDFDLGKKLEPKKSFNNKSIGNSEYTAPEYQEKGKLSTKTDVYSFGVVILELITGRKATDKISGEKRLVGWAKPLLGGKKYSELVDPIISNTYEEDQLRWLVKVTAQCLKKKPKERLSMNMVVSALQGIVDSEQSNITEDLTLATSDSRIGSDIDGSQVTLQGITDRKQCNMTEDIPQVVSNSRELDLLSPKAEQIERISLEEESCLRIKVEDNQFYTTGQKSSDILSQIDEQMQNMPQRLDLGNMIINQHMMDQTIAAEMSDSEQNLKSNHNENGVLAQKISNNRVIGHDQEDETSFVQMKRGLQPVPISGIVLQTQLQTSFTESLRDKNQDGIILEKSKSSACSICKSKRPKIVRMKDFTCDELVEATKGFSVENSLSESEDGPTFKGLLENKVKIVVKKHQMTRSQEEKTFKSEVQLFTKVRHKNVVMLLGLCTDESQLMIVYEQVCNGSLDHYLSRGNFQSLTWKERMKISIGTGRGLKYLHENKIIHGSIKASNILLTHDFEPLIGDFGFGKVKLEPKKSYKDKSGRDFGYAAPEYLENGKLSTKTDVYSFGVVLLELITGRRAMDKLQGGKNLVGWAKPLLGGKKYPQLVDSKISNTYEEEQLQWLVQVTEKCLKKNPKERYSMNMVVSALQGITESDDCCLIEDSSSSEKSYLPNDEPVIPMTNSHGHTMADPVSWEAEPLGRNTCNAETSFITAITTNNMIEQIKENQHKKESFHIEENDIEKKEVNKQQKINLDEKVIQDSYENEGLLSENQGETILESISKSSVCSICKSRRPNNEWQRKFTYEEIQAATEGFSIKYSLSEGAYGPAFKVQLDDKMKVAIKKIQVSSLQEEKVFVSEIQLLANTRHENIIMLLGSCIRQNQLLIVYEYSCNGSLDHYLSSKSGRLLTWRERMKIATGVSRGLKFLHENNIIHGRVKPSNILLNHDYKPLVGDFVFPKERRESKNSCKDKRVRNCGYIAPECKESGKVSTKADVYSFGVILLELITGCMVSDKIQGQKCLVEWARPLLGGKEYLELMDPEISSSYDEEELASLVLVSEKCLRKNPKERFTMNMVVSLMPSVVDINDINAIEDSSSEKSDELYCVSDVRSSEIEEVGEEEGLGRSEERENNIRCSNGNCMETKEKERCESYGGARHFFLDGGKEYIACEELFSLCNSI 1609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06189 1609 ProSiteProfiles Protein kinase domain profile. 284 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g06189 1609 Gene3D Phosphorylase Kinase; domain 1 280 381 - -
Vivi3g06189 1609 FunFam Proline-rich receptor-like protein kinase PERK8 1208 1321 - -
Vivi3g06189 1609 FunFam Proline-rich receptor-like protein kinase PERK8 778 891 - -
Vivi3g06189 1609 Gene3D Transferase(Phosphotransferase) domain 1 892 1101 - -
Vivi3g06189 1609 Gene3D Transferase(Phosphotransferase) domain 1 383 592 - -
Vivi3g06189 1609 Gene3D Transferase(Phosphotransferase) domain 1 1323 1532 - -
Vivi3g06189 1609 SUPERFAMILY Protein kinase-like (PK-like) 800 1086 IPR011009 -
Vivi3g06189 1609 FunFam Lectin-domain containing receptor kinase A4.3 892 1092 - -
Vivi3g06189 1609 SUPERFAMILY Protein kinase-like (PK-like) 288 569 IPR011009 -
Vivi3g06189 1609 ProSiteProfiles Protein kinase domain profile. 816 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g06189 1609 ProSiteProfiles Protein kinase domain profile. 1246 1513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g06189 1609 FunFam Proline-rich receptor-like protein kinase PERK8 267 381 - -
Vivi3g06189 1609 Gene3D Phosphorylase Kinase; domain 1 778 890 - -
Vivi3g06189 1609 Gene3D Phosphorylase Kinase; domain 1 1209 1321 - -
Vivi3g06189 1609 SUPERFAMILY Protein kinase-like (PK-like) 1229 1508 IPR011009 -
Vivi3g06189 1609 Pfam Protein tyrosine and serine/threonine kinase 820 1080 IPR001245 GO:0004672|GO:0006468
Vivi3g06189 1609 Pfam Protein tyrosine and serine/threonine kinase 1248 1508 IPR001245 GO:0004672|GO:0006468
Vivi3g06189 1609 Pfam Protein tyrosine and serine/threonine kinase 326 569 IPR001245 GO:0004672|GO:0006468
Vivi3g06189 1609 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 382 582 - -
Vivi3g06189 1609 PANTHER OS01G0253100 PROTEIN 716 1086 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06189 Vivi-Chr3 158295741 158303271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06189 293 592 Trihelix Transcription Factor Family AT5G38560 37.658 8.40e-53 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vivi3g06189 PK_Tyr_Ser-Thr 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06189 - - tpra:123916481 2278.06