Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06175 ATGGTTGGACACATGTTGAATATGATTTACATAGATATTCCAGTTGGGACTGGATTTTCTTACTCCCAAACGCAACAAGGCTACTACAGCAGTGATACACTATGGGTGGATCATGCATATTCTTTTATACAAAAGTGGCTTGTTGTTCATTCAAAGTTTAGCTCAAATCCATTTTATATTGGTGGTGGCTCATATTCAGGAATAATTACGGGTCCTCTTGTTCAAAAAGTATATCAAGGAAACCAAGCAAGACATGTGCCACACATAAACATCAAAGGTTATGTGATTGCAAGCCCATCTGTTGACACACATCAGATTTATAGCACACAAGTTTTATATGCTTACCATATGTCTCTAATACCAAAAGAACTTTATGAGTCGCTGGAAGAAAATTGTAAGGGTAATTATGTGAACATCGATCCAGACAACACAAAGTGTGTCTCAGATTATAAAGCTTATTCTGAGCTAGTTCGTTATATAAACCAACAACAAATTTTAGAACCTCTCTGTATGACTACACCTGCTGTGAACCAATTGATTCAACAACCAGTTCAAGATGATCAAGAATTACGGTGTAGAAGTTATTATCATATTCTTGTGAACATATGGGCAAACGATGAAAATGTAAGGAAAGCCCTTCATATAAGAGAGGGAACTAAAGGGGAGTTCTTGAGATGCAACAAAACTTTGGAATACACACAAAATCTACAACCTAGTGTTATAGATTATTATCGCAATCTCACCAATGCCAATATCCAAGCTCTCGTTTATAGTTCTGATCTTGACATGGCAATACCACAAGTGGGTACACAAGAATGGATAAAGTCATTGAATATGAGCATACATGACAAATGGCGTGCATGGTTTGTTGAAGGTCAAGTTGCAGGATTCACGGAAATATACAAAATGAAACAAGACCATTACTTAACATATGCGACCGTAAAGGGTGCTGGACATGTGGCCCAGACATTTAAGCCCAAGGAAGTTTATAATTTGATCAAGAGGTGGTTTTCATTTTCTCTTATCTAA 1029 0.3683 MVGHMLNMIYIDIPVGTGFSYSQTQQGYYSSDTLWVDHAYSFIQKWLVVHSKFSSNPFYIGGGSYSGIITGPLVQKVYQGNQARHVPHINIKGYVIASPSVDTHQIYSTQVLYAYHMSLIPKELYESLEENCKGNYVNIDPDNTKCVSDYKAYSELVRYINQQQILEPLCMTTPAVNQLIQQPVQDDQELRCRSYYHILVNIWANDENVRKALHIREGTKGEFLRCNKTLEYTQNLQPSVIDYYRNLTNANIQALVYSSDLDMAIPQVGTQEWIKSLNMSIHDKWRAWFVEGQVAGFTEIYKMKQDHYLTYATVKGAGHVAQTFKPKEVYNLIKRWFSFSLI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06175 342 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 326 IPR001563 GO:0004185|GO:0006508
Vivi3g06175 342 FunFam Carboxypeptidase 190 340 - -
Vivi3g06175 342 Pfam Serine carboxypeptidase 5 338 IPR001563 GO:0004185|GO:0006508
Vivi3g06175 342 SUPERFAMILY alpha/beta-Hydrolases 6 338 IPR029058 -
Vivi3g06175 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 309 322 IPR001563 GO:0004185|GO:0006508
Vivi3g06175 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 11 21 IPR001563 GO:0004185|GO:0006508
Vivi3g06175 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 46 71 IPR001563 GO:0004185|GO:0006508
Vivi3g06175 342 Gene3D alpha/beta hydrolase 4 340 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06175 Vivi-Chr3 157158499 157161394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06175 199 338 Calmodulin-binding Proteins AT2G22960 42.857 5.72e-35 124