Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06160 ATGACTTTTGATGCGTTTCTTGTTAGAGAAATTGCTATTGCATTTTTTATCTTCATCATTTCACATTTCTCCATAAGCTTAATTCTCAAAAACACTTATAAAAGACTCCCTCCAGGCCCAAGAGGATGGCCAATTCTAGGTGTTTTGCCACAATTGGGAACCATGCCTCATGTCACACTCACAAACATGTCCAAGAAATATGGACCCATCATGTACCTAAAAATGGGTACTTGTGACACTTTGGTTGCTTCAACTCCAGATGCAGCTAGAGCATTTCTCAAAACCCTAGACCATAATTTCCTAAACAGACCCAATATCATGGGTGCTACTTATTTAGGCTATGACTCACAAGACCTTGTTTTTGCCCAATATGGGCCTAAATGGAAACTCCTTAGGAAATTAACAACCTCACACATGCTTGGTGGAACAGCCCTTCAAAGTTGGAGTCATGTGAGAGAAAATGAAGTTAAACAAATGGTGAAATCAATTTATGAGTTTGGGAAAAAAGGTCAAGTAATAGAGATTGGTGATTTGTTGAGTTATGCAATAGTAAATATGGTGAGTCAAGTTGTACTAAGCAAACCTATATTTGAAAATAAAAGACAAGAGTCAAAGGAGTTTAAGGAAATGGTTGTGGAATTCATGATAATATCTGGAGTCAACATTGGTGATTTTGTTCCTTTTATTGGTTGGATGGACTTGGAAGGTTTGGTGGGTAAGATGAAACGTTTGCATAAGAGGTTTGATGTGTTTTTGAATGAGGTGATTCAAGATCATGTCAAGTCTGCTCATCAACGTAAAGAGAAGCCAGATATTTTGGATGTTTTGATGGAAAATGGTGATGATAATTCTGCTGACAGATTGAGTTTGTCCAACATCAAGGCTGTTTTACTGAATTTGTTCACTGCAGGGACAGATACATCAGCAAGCATCATAGAATGGGCACTTGCTGAAATGCTGAAAAACCCAAACATCTTAATAAAGGCACAAAAAGAGATAGATGAAGTGGTAGGAAAAGAAAGAATGGTTGTTGAATCTGACTTACAAAAATTACCATACCTTGAAGCAATATGCAAAGAGACATATCGTTTGCATCCTTCAACACCACTTAGTGTTCCAAGAGTATCAAGTAAAGCATGCCAAGTAAATGGTTACTACATTCCCAAAGATACAAGGTTGAATGTTAACATATGGGCCATAGGAAGAGACCCAAATATATGGGATAATCCATTAGAGTTCAATCCAGAGAGGTTTTTAAGTGCAAGAATTGATCCAAGTGGAGTTGATTTTGAGTTGATTCCTTTTGGAGCTGGAAGGAGGATTTGTGTTGGGTATAAGATGGCTATTGTGGTGATTGAGTTCATTTTGGGGACATTGATACATTCTTTTGACTGGAAATTACCAAATGGGGTAGAGCTCAACATGGATGAAGCCTTTGGAATTACTTTGCAAAAGGCAGTGCCTTTGTCAACTATGGTTACCCCTAGGTTGAACACTCATGCTTATGTTTAA 1512 0.377 MTFDAFLVREIAIAFFIFIISHFSISLILKNTYKRLPPGPRGWPILGVLPQLGTMPHVTLTNMSKKYGPIMYLKMGTCDTLVASTPDAARAFLKTLDHNFLNRPNIMGATYLGYDSQDLVFAQYGPKWKLLRKLTTSHMLGGTALQSWSHVRENEVKQMVKSIYEFGKKGQVIEIGDLLSYAIVNMVSQVVLSKPIFENKRQESKEFKEMVVEFMIISGVNIGDFVPFIGWMDLEGLVGKMKRLHKRFDVFLNEVIQDHVKSAHQRKEKPDILDVLMENGDDNSADRLSLSNIKAVLLNLFTAGTDTSASIIEWALAEMLKNPNILIKAQKEIDEVVGKERMVVESDLQKLPYLEAICKETYRLHPSTPLSVPRVSSKACQVNGYYIPKDTRLNVNIWAIGRDPNIWDNPLEFNPERFLSARIDPSGVDFELIPFGAGRRICVGYKMAIVVIEFILGTLIHSFDWKLPNGVELNMDEAFGITLQKAVPLSTMVTPRLNTHAYV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06160 503 PANTHER CYTOCHROME P450 98A9 17 502 - -
Vivi3g06160 503 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vivi3g06160 503 FunFam Cytochrome P450 82C4 28 494 - -
Vivi3g06160 503 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 SUPERFAMILY Cytochrome P450 37 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 Gene3D Cytochrome P450 29 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06160 503 Pfam Cytochrome P450 37 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06160 Vivi-Chr3 155856733 155859365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06160 5 502 Cytochrome P450 AT5G07990 46.275 1.31e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06160 K13083 - qsu:112039568 680.633