Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06123 ATGGCATCTTGCTTGAACCCACAAACCAGTGAAGATGACTCTCCCATACTCTTCTCAACTTCTAATTCCCCTCAAGACTCCATTAGTCCTTCTTCTTCTTCTTTCTACCATTCACCATCACCACAAAATTCATGCAAACTTTCTATCAAAAACCTCACATATACTTTACACCCTTATAACACCAACATTCCCTTTTCATTTTATCACCTTACTCAAAAACCACATCCTATAAACATACTCAAATCTATCTCTTTTGTTGCCAGAACTTCCGAGATAGTCGCCGTTGTTGGTCCTAGTGGCACAGGAAAATCAACCCTTCTCCGAATAATCGCAGGGAGGGTAAAAGACAAAGAGTTTGATTCAAAAGCTATCTCAATCAATGATCACCCTATGAGTACTCCTTCTCAGTTAAGAAAAATATGCGGCTTTGTGTCACAGGAAGACAACTTGCTTCCACTTCTAACTGTGAAAGAAACATTGCTTTTCAGTGCAAAGTTTAGGCTAAAACAAATGACTGCAAAAGAAAGAGAATTGAGAGTGGAAAACTTAATGCAAGAGTTAGGACTTTTTCATGTTGCTGATAGTTTTGTTGGTGATGAAGAAAATAGAGGTGTATCTGGTGGTGAAAGAAAAAGGGTATCAATTGGTGTTGATATGATTCATAATCCACCAATTTTAGTCTTAGATGAACCAACATCAGGACTTGATAGTACCTCAGCATTTCATGTGATTGAGCTTCTTTCATCAATGGTTAAATCAAAGCAAAGGATAGTGATTCTTTCAATTCATCAACCTAGTTATAGAATATTGCAGTATATTTCCAAGTTCTTGATTCTTTCTCATGGTTCAGTTGTTCACAATGGTAGCTTAGAATCACTAGAGGAAAGAGTATCTATTTTGGGATTTCAAATTCCATTACAACTTAATCCTTTAGAGTTTTCCATGGAAATTATACAAAGTTTAGAAGACTCTAGAAGTTCTATCATGGACGACGAAAGCGAAACTTCTTTTCCAAGTTTAACTTGGCAAGAGGAAGAAAAGGGTGGAAGTGGAATTTTCCAAACACAAAATGAAAGGGAAAGTTATGGAAATCTTTGTTATGTAAACTTGATGGAGATATTATTTCTGTGTTCAAGATTTTGGAAGATTATTTATAGAACAAAGCAACTATTTTTAGCAAGAACAATGCAAGCATTAGTTGGTGGATTTGGTTTAGGAAGTGTTTACATAAAGGTAAGAAAAGATGAAGATGGAATTGCAGAAAGGTTAGGTCTATTTGCATTTAGTCTCAGTTTTCTCTTGTCTTCAACAGTTGAAGCACTTCCAATATACCTTCAAGAAAGAACTGTTCTAATGAAAGAAGCATCAAGAGGAGCTTACAGAATATCTTCTTATATGATTGCCAACACTGTTGTTTTTCTTCCTTTTCTGTTTGTAGTTTCTATACTTTTTGCTGTTCCTGTTTATTGGATTGTAGGACTCAATCCTTCACTCAGTTCTTTCACTTTTTTCACTTTTGTGGTTTGGCTCATTGTGCTGATGGCAAGTTCTTTGGTACTCTTTTTAAGTTCTGTGTCTCCTGATTTCATTTCAGGAAACTCACTCATTTGCACTGTTCTTGGAGCCTTCTTTTTATTCTCTGGATATTTTATTCCAAAAGAGAGTATTCCAAAATATTGGCTTTTTATGTATTATGTGTCACTTTATAGGTACCCTTTGGATGCACTTCTAACAAATGAGTATTGGAATGTTGGAAATGAGTGTTTTTCACAACAAGGGTCTTCTTCATCAAAGTGTTTGGTTACTGGTTTTGATGTGTTGAAGAGTAGAGGAATTGAAAAAGATAACAGGTGGATGAATGTGGGAATAATGGTTGGATTCTTTGTGTTCTATCGTTTGCTTTGTTGGATCATACTTGCTAGAAAGGCCTCCAAGACAACAATATAA 1947 0.3554 MASCLNPQTSEDDSPILFSTSNSPQDSISPSSSSFYHSPSPQNSCKLSIKNLTYTLHPYNTNIPFSFYHLTQKPHPINILKSISFVARTSEIVAVVGPSGTGKSTLLRIIAGRVKDKEFDSKAISINDHPMSTPSQLRKICGFVSQEDNLLPLLTVKETLLFSAKFRLKQMTAKERELRVENLMQELGLFHVADSFVGDEENRGVSGGERKRVSIGVDMIHNPPILVLDEPTSGLDSTSAFHVIELLSSMVKSKQRIVILSIHQPSYRILQYISKFLILSHGSVVHNGSLESLEERVSILGFQIPLQLNPLEFSMEIIQSLEDSRSSIMDDESETSFPSLTWQEEEKGGSGIFQTQNERESYGNLCYVNLMEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKVRKDEDGIAERLGLFAFSLSFLLSSTVEALPIYLQERTVLMKEASRGAYRISSYMIANTVVFLPFLFVVSILFAVPVYWIVGLNPSLSSFTFFTFVVWLIVLMASSLVLFLSSVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVGNECFSQQGSSSSKCLVTGFDVLKSRGIEKDNRWMNVGIMVGFFVFYRLLCWIILARKASKTTI 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06123 648 MobiDBLite consensus disorder prediction 1 37 - -
Vivi3g06123 648 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 65 306 IPR003439 GO:0005524
Vivi3g06123 648 Pfam ABC transporter 80 233 IPR003439 GO:0005524
Vivi3g06123 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 302 IPR027417 -
Vivi3g06123 648 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Vivi3g06123 648 Pfam CDR ABC transporter 589 639 IPR010929 GO:0005524|GO:0016020|GO:0042626|GO:0055085
Vivi3g06123 648 SMART AAA_5 89 291 IPR003593 GO:0016887
Vivi3g06123 648 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 30 633 - -
Vivi3g06123 648 FunFam ABC transporter G family member 23 71 304 - -
Vivi3g06123 648 Gene3D - 65 306 IPR027417 -
Vivi3g06123 648 Pfam ABC-2 type transporter 263 328 IPR043926 GO:0140359
Vivi3g06123 648 Pfam ABC-2 type transporter 373 581 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06123 Vivi-Chr3 154438336 154440354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06123 37 293 Calmodulin-binding Proteins AT2G36910 28.185 6.30e-13 70.5