Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06115 ATGACCATTCTTGTTACCCTGCTTGTTATTACAAAGCTACTATTATTATTTTTCTTCAACTTTTCTTCTGCAACCGATACCATTACACAATCCCAACCACTTTCCGATGGCAGCACCTTGGTTTCTAAGGATGGCACATTTGAATTGGGTTTCTTCAATCCCGGTACTTCCACAAACCGCTATGTTGGAATTTGGTACAAAAATATCCCCGTAAGAAAAGTTGTTTGGCTTGCAAACCGTGATAATCCAATCAAAGACAGTTCAAGCAAGCTGATCATAAGTCATGATGGAAACCTCGTACTTCTAAATCAGAATCAATCAAGTATATGGTCAACAAACACAACATCAACATCATCATCATCATCATCAAAGGTTCCGGTTGTGCAACTCTTGGACAATGGAAACCTAGTACTTAAAAATGACGGTGAGGAAAATTTTCTGTGGCAGAGCTTTGATTATCCTAGTGATACAATATTAGCAGGAATGAAAGCTGGATGGGACAAGAAAAAGGGTCTTAATAGGATTCTCGTTGCATGGAAAAACTGGGAAGATCCATCTTCAAGTGATTTTACTTCCGCTGTGGTACAATCTCCTAGTCCTGAAAGTTTTATTTTCAAAGGCACAACCAAATATTTCAGGACTGGACCATGGACTGATCGCCGATCTAGTGGCGTAATTGGATTGGCAGAGAATCCACTTTATGATTATGAGTTTGTCAACAATGAAGATGAGGTATATTATACGTTCACACTCAAAAATACTTCTGTGGTTTCTATACTTGTGTTGAACCAAACAAGTTCGGTTCGTCAACGCTTGATTTGGATTTCAGAAACCAAGTCATGGAATGTTTACCAAAACCTACCTCAGGATAGTTGCGATGTTTATAATGTTTGTGGAGATAATGGTTTGTGTGCGCTTAATGAGTCACCTATGTGTCAGTGTTTAGATGGGTTCAAGCCGAAATCGGCGCAGCAATGGAATGCAATGGATTGGAGACAAGGTTGTGTGCGTAATGGTAATTGGAGCTGTGGGGTGAAAGACAGAGATGGGTTTAAGAAAATTGCTGCGGTGAAACTGCCAGACACTGAACATTCTTGGATTGATGAGAAAATGACACTTAAGGATTGTAAAGCTAAATGTTTGGAAAATTGTTCGTGTAGTGCTTACTCGAGTTTAGACTCGAGTGGAGCTGGTATTGGTTGTTCTATTTGGTTTGGTGAACTTGCTGATCTTAGAATTTCACAAACTGGACAAGACTTATATGTACGAATCGATGTTTCTGATATTGGTGGTAAAAATGGACATACCAAAACCATAGTATTGGCGGTTTCAATTACAGTTTCAGTAGTTCTTGTGGTGTTATTGGGATTCATCTACATTTATATTAAAAAGGCAAAATATAAAGAGAATGCCATAAGATCAGAAGAGAAAGATGAAGACACACATGAAGATTTTGAGCTTCCTATCTTTGATCAAGCTACACTACTCAAGGCAACACATAACTTCTCTTTTAATAACAAACTTGGCGAAGGTGGTTTTGGACCCGTATACAAGGGTACATTGCTCGATGGACGACAAATTGCTGTTAAAAGGCTTTCAAAGAGTTCTGGACAAGGAATAAAAGAGTTTAAAAATGAAGTTGTGTTATGTGCTAAACTTCAACACCGAAATCTTGTAAAAGTTGTTGGATGTTGTATCGAAGGAGAAGAGAAAATGTTGATCTATGAATACATGTCCAACAAAAGTCTTGATTCATTTCTCTTTGATCCATCTCAAAGTAAGTTGTTAGATTGGTCCACGCGCTTTAACATTCTATTTGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCAAGATTAAGGATCATACACAGAGATTTGAAAGTGAGTAATATTTTATTAGACGATGATATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGAATGTGTGGAGGTGATCAAATCGAAGGGATAACAAATAGAATAGTTGGCACATACGGTTATATGGCACCTGAATATGCAATTGATGGATTATTCTCTATAAAATCAGATGTATTTAGCTTTGGTGTATTATTATTAGAAATTATGAGTGGAAAGAAAAATAGAGCACTTAACTACCAAGAGCAGGATCATAATCTTATTGGATATGCATGGAGATTATGGAAAGAGAGCACTCCACTCGAATTGATCGATGATTATTTAAGGGATTCCTGTATTGAATCTGAAGCATTACGTTGCATTCAAATTGGTCTATTATGCCTGCAATATCATCCCGATGATAGACCCAGCATGTCATCCATCGTTGTCATGTTGAGTAGTGTAAATACTTTGCCTGAACCAAAGGAACCTGGTTTCTTGATTAAAAAATTTTCAGTTGAAGGAGAACCTTCTTCTGGAAGACAAACATCTTCTTCGGTAAATGAAGTAACCATCTCATTATTAGACGCTAGATAG 2460 0.3732 MTILVTLLVITKLLLLFFFNFSSATDTITQSQPLSDGSTLVSKDGTFELGFFNPGTSTNRYVGIWYKNIPVRKVVWLANRDNPIKDSSSKLIISHDGNLVLLNQNQSSIWSTNTTSTSSSSSSKVPVVQLLDNGNLVLKNDGEENFLWQSFDYPSDTILAGMKAGWDKKKGLNRILVAWKNWEDPSSSDFTSAVVQSPSPESFIFKGTTKYFRTGPWTDRRSSGVIGLAENPLYDYEFVNNEDEVYYTFTLKNTSVVSILVLNQTSSVRQRLIWISETKSWNVYQNLPQDSCDVYNVCGDNGLCALNESPMCQCLDGFKPKSAQQWNAMDWRQGCVRNGNWSCGVKDRDGFKKIAAVKLPDTEHSWIDEKMTLKDCKAKCLENCSCSAYSSLDSSGAGIGCSIWFGELADLRISQTGQDLYVRIDVSDIGGKNGHTKTIVLAVSITVSVVLVVLLGFIYIYIKKAKYKENAIRSEEKDEDTHEDFELPIFDQATLLKATHNFSFNNKLGEGGFGPVYKGTLLDGRQIAVKRLSKSSGQGIKEFKNEVVLCAKLQHRNLVKVVGCCIEGEEKMLIYEYMSNKSLDSFLFDPSQSKLLDWSTRFNILFGIARGLLYLHQDSRLRIIHRDLKVSNILLDDDMNPKISDFGMARMCGGDQIEGITNRIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIMSGKKNRALNYQEQDHNLIGYAWRLWKESTPLELIDDYLRDSCIESEALRCIQIGLLCLQYHPDDRPSMSSIVVMLSSVNTLPEPKEPGFLIKKFSVEGEPSSGRQTSSSVNEVTISLLDAR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06115 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 151 - -
Vivi3g06115 819 SMART blect_4 31 154 IPR001480 -
Vivi3g06115 819 Gene3D Hepatocyte Growth Factor 342 424 - -
Vivi3g06115 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Vivi3g06115 819 ProSiteProfiles Bulb-type lectin domain profile. 25 151 IPR001480 -
Vivi3g06115 819 Gene3D Transferase(Phosphotransferase) domain 1 578 784 - -
Vivi3g06115 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 764 - -
Vivi3g06115 819 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Vivi3g06115 819 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Vivi3g06115 819 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Vivi3g06115 819 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g06115 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Vivi3g06115 819 Pfam Protein tyrosine and serine/threonine kinase 503 772 IPR001245 GO:0004672|GO:0006468
Vivi3g06115 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Vivi3g06115 819 SMART ntp_6 346 424 IPR003609 -
Vivi3g06115 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 467 577 - -
Vivi3g06115 819 CDD B_lectin 31 154 IPR001480 -
Vivi3g06115 819 CDD PAN_AP_plant 342 424 - -
Vivi3g06115 819 Gene3D - 20 151 IPR036426 -
Vivi3g06115 819 CDD STKc_IRAK 508 773 - -
Vivi3g06115 819 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Vivi3g06115 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Vivi3g06115 819 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g06115 819 SUPERFAMILY Protein kinase-like (PK-like) 485 785 IPR011009 -
Vivi3g06115 819 Pfam Domain of unknown function (DUF3403) 778 819 IPR021820 GO:0004674
Vivi3g06115 819 Pfam D-mannose binding lectin 74 180 IPR001480 -
Vivi3g06115 819 Pfam PAN-like domain 343 411 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06115 Vivi-Chr3 154277940 154281784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06115 431 790 Receptor kinase-like Gene Family AT4G23230 54.571 8.27e-131 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g06115 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06115 - - tpra:123915292 1260.36