Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06032 ATGTATCATTTTCTCATTGATAGATTTACCCGTCATAGAATCCTTCACTCTACTGTTCTATGCCGCAATGCTTATTCTATTTTCTTCAATTCTTGTTCTTTCTCTGTTTTGAACACAAACCACCATCATCAAACCGACAACTTTACGTTGTCAGCCCTCGTAAATTCATGCGGTTTGTCCCCTGAAACTGTCCTTAAACTCTCCAAAAGGTTGCAAACCATAAACCCTAATGGCCCAAATGCTGTTGTTCAACTTCTCACCAACCATGGCTTCTCTGATTCCCAGTTACGTAGCTATGTCAAGAAACAACCTTCGGTACTTTTATCAGATGCGGAAAAGACCCTTTTGCCAAAGCTCAAATTTTTGCAATCCATTGGGGTTTCAACCACTGATCTCCCCAAAATCCTAATCAGGAACACTTCCTTTTTGTCAAAAAGCTTGGACAAACACTTAATACCTCGCTATGAGATCATTAGAAGCCTAGTTTGCAATGATAAAGAGGTGGTTTCAGCTTTGAAGCATGGTTCCTGGAACCTTAACTGTGGCTGGGTTGTAAATGATGCAGCTCTGAACATTGAGGTTTTGAGGAACCTTGGTGTTCCTCAAGGTTGCATTTCCCTTTTGGTATCCAATTTTCCCGGTGTAGCATTCACCAAACACTCGGTATTTGCTGAGGCTGTTAATTCGGTCAAGGAAATGGGGTTTGATCCATCAAAGTCGAATTTTGTTTTGGCACTCCAGGTGTTTGCGAAAATGAACAAGGATATTTGGGAATCGAGATTTAAGATTTTCGAGAAATGGGGTTGGTCGAGAGATATGTGTCTTTCGGCTTTCTTAAAGCACCCGCAATATATGATGATCTCAGAAAAGAAGATAGTAAAAGCGATGAACTTCTTGGTGAATGATACTGGTCTTAGCCCCGAAGAAATTGCGAGAAGGCCTGGTATGCTGAACCGCAACTTGGAGAAGACATTTATCCCTAGATGGGCTGTTCTTAAAATTTTGAGGTCAAGGGGTTTGGTAAAGAGTGATTTACGCATAAGTAGTGTTATTTCGATAAGTGAGGAAAAGTTTTTGGAGAGATATGTAACCCGATTTCAGAAAGATCTGCCCCTGTTATTGGATGCATATAATGGTCAGGTGCTAGATTGA 1152 0.408 MYHFLIDRFTRHRILHSTVLCRNAYSIFFNSCSFSVLNTNHHHQTDNFTLSALVNSCGLSPETVLKLSKRLQTINPNGPNAVVQLLTNHGFSDSQLRSYVKKQPSVLLSDAEKTLLPKLKFLQSIGVSTTDLPKILIRNTSFLSKSLDKHLIPRYEIIRSLVCNDKEVVSALKHGSWNLNCGWVVNDAALNIEVLRNLGVPQGCISLLVSNFPGVAFTKHSVFAEAVNSVKEMGFDPSKSNFVLALQVFAKMNKDIWESRFKIFEKWGWSRDMCLSAFLKHPQYMMISEKKIVKAMNFLVNDTGLSPEEIARRPGMLNRNLEKTFIPRWAVLKILRSRGLVKSDLRISSVISISEEKFLERYVTRFQKDLPLLLDAYNGQVLD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06032 383 FunFam Mitochondrial transcription termination factor-like 147 370 - -
Vivi3g06032 383 Gene3D Transcription termination factor 3, mitochondrial 160 370 IPR038538 -
Vivi3g06032 383 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Vivi3g06032 383 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Vivi3g06032 383 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Vivi3g06032 383 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Vivi3g06032 383 Pfam mTERF 254 359 IPR003690 GO:0003690|GO:0006355
Vivi3g06032 383 Pfam mTERF 84 312 IPR003690 GO:0003690|GO:0006355
Vivi3g06032 383 PANTHER CGI-12 PROTEIN-RELATED 48 365 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06032 Vivi-Chr3 148964878 148967161 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi3g06032 mTERF 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06032 K15031 - gmx:106799612 431.795