Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06013 ATGGGCATTGAAAATGGAAATTTTACTGTGAGTATGACTAATGAAGAGGTGGTAGCAGCAGTGTTACCAATTCATGAACATTCCCTCCCACTCTCTAATCTTGACTTACTTCTACCTAAAGTAGATGTTGGAGTTTTCTTTTGTTACAAGAATCCCATGCTGTCTTCGACATCGTCGACACCAACAACGTTAATAACCTTTGAATCTATGGTTGTGTCTCTCAAGAAGGCATTGGCTAAAGTTTTGGTATCTTACTATGTTTTTGCAGGTGAAGTTGTGTCTAGCTCTATGGGTGAACCTGAGCTTCTTTGTAATAACCGTGGGGTTGATTTTGTTGAAGCTGTGGCTGATATTGAGCTTCAATGTCTCAATTTTTATAATCCTGATGAATATGTTGAGGGAAAGCTGGTTCCAAAGAAGAAGCATGGCGTCTTCGCTATACAGGCAACCTCATTGAAGTGTGGTGGGATAGTAGTGGCATGTACATTTGATCATCGCATAGCAGATGCTTATTCAACAAACATGTTTTTAGTTTCATGGGCCGAGATGGCCCATCCCACAAAGCCCATCAAGCCCACAACCATAACAACAACTAACAAACCATGTTTTCGTCGCTCCCTCCTTAGCCCTCGTGGTTATCCAACTTCCATCCACCATTCCATCAACGACATGTACATTCCCATTTCCAAACTCCCTCCTCCTTCATCCACCACTACCAAACCATTACTCAGCCGTATATACTATGTCACTGCAGAGGATCTCTACCGCTTGCAAAAACTCGCTGGTGGGACTTGCAATGGTAGTAATTATAATACCAAGCCTACAAAGCTTGAGTCTTTCTCTGCCTACTTGTGGAAGTTGATTGCTCATGCAGCTATAAAGGAGGATAGTAAAATGGCCATTGCCAAAATGGGTATAGTGGTTGATGGAAGAAAGAGACTTGAAAATTATAGTATTGGTGAAGAAATGGCCAACTATTTTGGAAATGTTCTTTCTATACCTTTTGGTGCAAAACCGGTGGAGGAGTTGGTTGATAAACCATTAGGATGGGTGGTTGATGAGGTTCGTGAGTTCGTATCTATAGCAACAACAGAAGAGCATTTCTTAGGACTCATTGATTGGGTTGAAATGAATCGACCTAATCCTGGATTGGCTAAGATTTACTGTGGTGGCTCTAAGGAAGGGCCAGCTTTTGTGGTGTCTTCCGGACAAAGATTTCCGGAAGAAAAAATGAACTTCGGGTGGGGGGAAGTTGTGTTTGGATCTTACCATTTTCCTTGGTGTGGTGAAGCTGGTTATGTGATGCCAATGCCAAGTCCTTTAAGGAATGGTGATTGGATTGTGTACATGCACCTTTTGAAACAACATTTGGAGATCATGGAATCGAAGGCAGACCACGTCTTTGTCCCATTAACATGGGATTATCTCAATCAGTGA 1437 0.421 MGIENGNFTVSMTNEEVVAAVLPIHEHSLPLSNLDLLLPKVDVGVFFCYKNPMLSSTSSTPTTLITFESMVVSLKKALAKVLVSYYVFAGEVVSSSMGEPELLCNNRGVDFVEAVADIELQCLNFYNPDEYVEGKLVPKKKHGVFAIQATSLKCGGIVVACTFDHRIADAYSTNMFLVSWAEMAHPTKPIKPTTITTTNKPCFRRSLLSPRGYPTSIHHSINDMYIPISKLPPPSSTTTKPLLSRIYYVTAEDLYRLQKLAGGTCNGSNYNTKPTKLESFSAYLWKLIAHAAIKEDSKMAIAKMGIVVDGRKRLENYSIGEEMANYFGNVLSIPFGAKPVEELVDKPLGWVVDEVREFVSIATTEEHFLGLIDWVEMNRPNPGLAKIYCGGSKEGPAFVVSSGQRFPEEKMNFGWGEVVFGSYHFPWCGEAGYVMPMPSPLRNGDWIVYMHLLKQHLEIMESKADHVFVPLTWDYLNQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06013 478 Gene3D - 226 463 IPR023213 -
Vivi3g06013 478 Gene3D - 9 223 IPR023213 -
Vivi3g06013 478 Pfam Transferase family 9 466 - -
Vivi3g06013 478 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06013 Vivi-Chr3 147804505 147809478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06013 32 461 Monolignol Biosynthesis Gene Families AT5G48930 25.676 1.38e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06013 - - tpra:123917257 768.844