Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06006 ATGGTAGTGAAAGTGTATGGACCAGACTATGCTTGCCCTAAAAGGGTGATAGTGTGTCTCATTGAAAAGGAAGTTGAGTTTGAAACAGTTCATGTTGATGGCTTTAAGGGAGAGCACAAGGAACCTCACTATCTCAAGTTGCAGCCCTTTGGATTACTTCCTGTTATTCAAGATGGTGATTATATTCTCTATGAATCTAGGGCAATTTTAAGGTACTATGCTGAAAAGTACAAAAACCAAGGAACTGATTTGCTAGGAAAGACAATAGAAGAAAGGGGCCTAGTGGAGCAATGGCTAGAAGTTGAAGCACATAACTTCAACCCACCAATCTACAACTTAGTCATGAATATCTTGGTTCACCCATTGTTGGGCCTTCCATCTGACCCAAAAGCTATTGAAGAGAGTGAAGAAAAGCTTGGAAAGGTGTTGGACATTTATGAGGAGAGGCTATCAAAGACCAAATACTTGGCTGGTGATTTCTTCAGCCTTGCTGACCTTAGTCATCTCCCATTTGGACATTATTTGATGAATTCAATGGGGAAAGAGAATATGGTAAAGGAGAGGAAGCATGTGAATGCTTGGTGGGATGATATTAGTAATAGGCCATCTTGGAAGAAGGTTCTTCAGCTTTACAAATATCCTATGTAA 648 0.4012 MVVKVYGPDYACPKRVIVCLIEKEVEFETVHVDGFKGEHKEPHYLKLQPFGLLPVIQDGDYILYESRAILRYYAEKYKNQGTDLLGKTIEERGLVEQWLEVEAHNFNPPIYNLVMNILVHPLLGLPSDPKAIEESEEKLGKVLDIYEERLSKTKYLAGDFFSLADLSHLPFGHYLMNSMGKENMVKERKHVNAWWDDISNRPSWKKVLQLYKYPM 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06006 215 CDD GST_N_Phi 2 76 - -
Vivi3g06006 215 SUPERFAMILY GST C-terminal domain-like 78 208 IPR036282 -
Vivi3g06006 215 FunFam Glutathione S-transferase F2 2 85 - -
Vivi3g06006 215 SUPERFAMILY Thioredoxin-like 3 81 IPR036249 -
Vivi3g06006 215 Gene3D - 86 208 - -
Vivi3g06006 215 CDD GST_C_Phi 90 208 IPR034347 -
Vivi3g06006 215 SFLD Glutathione Transferase (cytosolic) 4 201 IPR040079 -
Vivi3g06006 215 Pfam Glutathione S-transferase, N-terminal domain 12 74 IPR004045 -
Vivi3g06006 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Vivi3g06006 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Vivi3g06006 215 Gene3D Glutaredoxin 1 85 - -
Vivi3g06006 215 Pfam Glutathione S-transferase, C-terminal domain 117 202 IPR004046 -
Vivi3g06006 215 FunFam Glutathione S-transferase F2 86 208 - -
Vivi3g06006 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 209 - -
Vivi3g06006 215 SFLD Main (cytGST) 4 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06006 Vivi-Chr3 147310596 147314791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06006 1 215 Glutathione S-transferase Gene Family AT2G30870 59.535 5.62e-98 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06006 K00799 - gmx:100809406 389.037