Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi3g05976 | ATGGAAATGATGTCTCAAAAATTTTACATCCTTCATATAAATCAATCCTCTCAAGTTTTGAGGATTGCTAGAGACGATTTATGGGGTTTTCTTCCTGGAAATGCGTTTTCTTGTCCCAAACATTATACTAATGTGGAAATAGATTCCCATTTCTTCCATTACACATCCAACAATGAGATGTATACGATATTGTATAAGTGTGGTCCTCTTCCAAATTCATTCTTTACTCCCTCATTTCAAATTTCTTTTGAAGTAATCGGTTGTTATATGGAGGGAAAATTTCATAGTACATACGTAGTATCAAGTTCTAAATTGACTGATTTCAATGCGGTGAACTGCAAGAATAGTATCACAGTTCCTGGAAAAAAGAATTCTTTGCCAAACAAATCATGTGTTATGGAGGGTATTTTAGTCCAAGGATTTGAGGTGAGATGGAATGGTGTTGGGGAAGACAAGTGCCATGCTTGTACAAAATATGGAGGGAGATGTGGATACAAAAAAGTAGAAAATGCATTTATTTGTCTCTCGAAGAGATCTGCCACATCAAAAGGAAAACTTCCAGATGGGCGTGAAGTGGCAGTGAAAAGGCTTTTTGAATACGGCGTCAATAAAGAACGACAATTTCTTAACGAAATAAATATACTAGCAAGAACTGATCATCCCAATCTCATCTTGGTATATGGTTGCACATCACTCAAAAGTCGTCGAGCTTTGGTTGTCTACGAGTATGTTCCTAATGGATTTTTGAGTGATCATCTTCAAGGTGACAAAGCAACACCTAATAAACTTCCTTGGAACATTAGAATGAGGACTACCGTGGAGACAGCAGGTGCATTGAACCATCTTCATGCTTCTGATATCATTCATAGGGATATTAAAACGAGTAATATTCTCTTAGATGCCGAATACCATGTTAAAGCAGCTGATTTTGGACTTTCGCGCCATATGTAG | 951 | 0.3712 | MEMMSQKFYILHINQSSQVLRIARDDLWGFLPGNAFSCPKHYTNVEIDSHFFHYTSNNEMYTILYKCGPLPNSFFTPSFQISFEVIGCYMEGKFHSTYVVSSSKLTDFNAVNCKNSITVPGKKNSLPNKSCVMEGILVQGFEVRWNGVGEDKCHACTKYGGRCGYKKVENAFICLSKRSATSKGKLPDGREVAVKRLFEYGVNKERQFLNEINILARTDHPNLILVYGCTSLKSRRALVVYEYVPNGFLSDHLQGDKATPNKLPWNIRMRTTVETAGALNHLHASDIIHRDIKTSNILLDAEYHVKAADFGLSRHM | 316 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi3g05976 | 316 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 287 | 299 | IPR008271 | GO:0004672|GO:0006468 | |
Vivi3g05976 | 316 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 3 | 179 | IPR044652 | GO:0004672 | |
Vivi3g05976 | 316 | SMART | serkin_6 | 165 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi3g05976 | 316 | ProSiteProfiles | Protein kinase domain profile. | 154 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi3g05976 | 316 | SUPERFAMILY | Protein kinase-like (PK-like) | 183 | 315 | IPR011009 | - | |
Vivi3g05976 | 316 | Gene3D | Transferase(Phosphotransferase) domain 1 | 166 | 316 | - | - | |
Vivi3g05976 | 316 | Pfam | Protein tyrosine and serine/threonine kinase | 188 | 316 | IPR001245 | GO:0004672|GO:0006468 | |
Vivi3g05976 | 316 | Pfam | Wall-associated receptor kinase C-terminal | 97 | 176 | IPR032872 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi3g05976 | Vivi-Chr3 | 144827008 | 144828697 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi3g05976 | 184 | 314 | Receptor kinase-like Gene Family | AT1G25390 | 58.647 | 1.46e-45 | 161 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Vivi3g05976 | PK_Tyr_Ser-Thr | 4.2e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi3g05976 | - | - | vvo:131639043 | 635.95 |