Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05871 ATGGTAACTATTACAGCTTCTTATACTGTGATTCCACAAGAATCAACTCCTCAAGGTTGTTTATGGCTCTCTGATATAGATCAAGTTTCACGTTTCCGCCATACAACAACTATTTACATTTACAAACCAACACAGAACCCAGAAAATGCCATAGAAACCTTGAAAAACTCTCTCTCCAAAATTCTTGTTCACTACTATCCTATGGCTGGTAGATTATATTATACGGAAGGTGCTAGGTTAGAATTGAATCTCAATGCAAAAGGTGCTATTTTGCTTGAAGCTAAAACCACTAAAACAATTCATGATTATGGTGACTTTTCACCTTCCGACTCCACCAAAGAGCTTGTTCCATTAATTGATTATAATCAACCCATTGAAGATATTCCATTATTTGTTGTTCAATTCACAAGGTTCCAAAACAATGATGAAGGCTTTGCAATTGGTGTTGCTTTTTTCCATCTTTTATCAGATGGAGTTGGAGCTATTAGATTCATCAACTCATGGGCCAAAATAGCTAGAGGAGAAACACTTGGGGCTAATGAGTTACCCTTTCTTGATAGAACATTACTCAAATTTTCACACACACCGGTAGAGCCACATTTTGAACACATGGAATTGAAGCCCCTTCCACTCATTCTAGGAAGAACAGACACAAGTGAAGAAAGAAAGAAGAAAACTTCAGCAACATTGTTGAGACTCTCACCGGAACAAGTTGAAGGGATAAAGAAAAAAGCTAATGAGTATAATATGAAGAAAAAAGGCTCAAGGGGTTTCAGTAGATTTGAAGCAATTGGTGCGCATATATGGAGATGTGCATCTAAGGCACGTGAGCTTGGAGAGAATCAACAAAGTGTTGTTAGATTCGGTGCTGATATTAGAAGCAGAATGATTCCACCTCTTCCTAAAAACTATTTTGGGAATGCTTTGACACAAACAGCAGCAAAAGGGTATGTTGGAGAAATCACATCAAAACCATTGGGTGATGTTTCACAAATGATAAGAGAAGCAATTGAGTTTGCAAGTGATGAATTTATAAGGTCACAGATTGATATTATTAGGGGGTTTGAACATTTGGATGATGCAAGAGCTTTGTTTTTAGGTGGCGAAGGTGATAAATTTCCATATGTTGGGAATCCTAATTTTCATTTAACTAGTTGGATGAGTATGCCTGTTTATGAAGCTGATTTTGGATGGGGGAAGCCTGCTTATTTTGGAATGGCAAGTGTGTTTCCACATGATAGGGCAGTCATCCTTCGTAGTCCTGATGAAGATGGATCTGTTCTTGTGTGTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAAAAAGTTCTTCTATGAGGATATTTGA 1350 0.3748 MVTITASYTVIPQESTPQGCLWLSDIDQVSRFRHTTTIYIYKPTQNPENAIETLKNSLSKILVHYYPMAGRLYYTEGARLELNLNAKGAILLEAKTTKTIHDYGDFSPSDSTKELVPLIDYNQPIEDIPLFVVQFTRFQNNDEGFAIGVAFFHLLSDGVGAIRFINSWAKIARGETLGANELPFLDRTLLKFSHTPVEPHFEHMELKPLPLILGRTDTSEERKKKTSATLLRLSPEQVEGIKKKANEYNMKKKGSRGFSRFEAIGAHIWRCASKARELGENQQSVVRFGADIRSRMIPPLPKNYFGNALTQTAAKGYVGEITSKPLGDVSQMIREAIEFASDEFIRSQIDIIRGFEHLDDARALFLGGEGDKFPYVGNPNFHLTSWMSMPVYEADFGWGKPAYFGMASVFPHDRAVILRSPDEDGSVLVCLHFQIAHLELFKKFFYEDI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05871 449 Gene3D - 1 208 IPR023213 -
Vivi3g05871 449 Gene3D - 214 448 IPR023213 -
Vivi3g05871 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
Vivi3g05871 449 Pfam Transferase family 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05871 Vivi-Chr3 140059487 140061102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05871 2 447 Monolignol Biosynthesis Gene Families AT5G48930 34.375 1.60e-89 277