Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05870 ATGAATGCCCACACTCTGAAAAAGATGAATCTGATTGAGACAATTGCTGCTCCGCCCAGCGTAGATAATGAAATATTGACCAAAAAGGCTCCTGCTCTGGCTGTTTTTGAATTGTTCTTCAGAAATGAGCATCCAAATGTTGTTGTCAGTTATCTGAAACTATGTAAAGAAGAAGGCTCTGCGTATGATCTTATGTGGATAAGCAAACAAAAGCTTTTCACTACAGCTGATTTAATACCAGAAATAGAGGAACAAAAAAAGAAGAAGAAAAGAAAGCAAGAACAATCAGAAAGAAGGAAAGAAAAGAAGGAAAAGAAAGAGAAGAAAGAACAGCCTCTAAGCTTACCCAGTCAGCTTGAAGCTCAAACCACTAAAACTATTCATGATTATGGTGACTTTTCACCTTCTGACTCCACCAAAGAGCTTGTTCCATTAATTGATTATACTCAACCCATTGAAGATATTCCATTATTTCTTGTGCAACTCACAAGGTTCCAAAATAATGATGAAGGCTTTGCAATTGGAGTTGCTTTTTTCCATCTTTTATCAGATGGACTTGGAGCTATTAGATTCATCAACTCATGGGCCAAAGTAGCTAGAGGAGAAACACTTGAGGCTAATGAGTTACCCTTTCTTGATAGAACATTACTCAAATTTTCTCACAAACCAGTAGAACAATATTTTGAACACATGGAGTTAAAGCCACTACCTCTCATTCTTGGAAGAGAAGACACAAGTGAAGAAAGAAAGAAAAAAACGTCAGCAACATTGTTGAGACTTTCACCGGAACAAGTTGAAGAGTTAAAGAAAAAAGCTAATGAATATCATATGAAGAAAAAAGGGTCTAGGTGTTTTAGTAAATATGAAGCAATTGGTGCACATATATGGAGATGTGCATCTAAGGCACGCGAGCTTGGAGAGAATCAACAAAGTGTTGTTAGATTCCATGCTGATATTAGAAGCAGAATGATTCCACCTCTTCCTAAAAACTATTTTGGGAATGCTTTGACACAAACAGCAGCAAAAGGATATGTTGGAGAAATCACATCAAAACCATTGGGTGATGTTTCACAAATGATAAGAGAAGCAATTGAGTTTGCAAGTGATGAATTTATAAGGTCACAGATTGATATTATTAGGGGATTTGAACATTTGGATGATGCAAGAGCTTTGTTTTTAGGTGGCGAAGGTGATAAATTTCCATATGTTGGGAATCCTAATTTTCATTTAACTAGTTGGATGAGTATGCCTGTTTATGAAGCTGATTTTGGATGGGGGAAGCCTGCTTATTTTGGAATGGCTAGTGTGTTTCCACATGATAGGGCAGTCATCCTTCTTAGTCCTGATGAAGATGGATCTGTTCTTGTGTGTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAAAAAGTTCTTCTATGAGGATATTTGA 1431 0.3676 MNAHTLKKMNLIETIAAPPSVDNEILTKKAPALAVFELFFRNEHPNVVVSYLKLCKEEGSAYDLMWISKQKLFTTADLIPEIEEQKKKKKRKQEQSERRKEKKEKKEKKEQPLSLPSQLEAQTTKTIHDYGDFSPSDSTKELVPLIDYTQPIEDIPLFLVQLTRFQNNDEGFAIGVAFFHLLSDGLGAIRFINSWAKVARGETLEANELPFLDRTLLKFSHKPVEQYFEHMELKPLPLILGREDTSEERKKKTSATLLRLSPEQVEELKKKANEYHMKKKGSRCFSKYEAIGAHIWRCASKARELGENQQSVVRFHADIRSRMIPPLPKNYFGNALTQTAAKGYVGEITSKPLGDVSQMIREAIEFASDEFIRSQIDIIRGFEHLDDARALFLGGEGDKFPYVGNPNFHLTSWMSMPVYEADFGWGKPAYFGMASVFPHDRAVILLSPDEDGSVLVCLHFQIAHLELFKKFFYEDI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05870 476 MobiDBLite consensus disorder prediction 84 113 - -
Vivi3g05870 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 140 471 - -
Vivi3g05870 476 MobiDBLite consensus disorder prediction 84 118 - -
Vivi3g05870 476 Gene3D - 116 235 IPR023213 -
Vivi3g05870 476 Pfam Transferase family 120 474 - -
Vivi3g05870 476 Coils Coil 79 111 - -
Vivi3g05870 476 Gene3D - 242 475 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05870 Vivi-Chr3 140014401 140019141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05870 121 474 Monolignol Biosynthesis Gene Families AT5G48930 33.616 4.31e-67 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05870 K13065 - gmx:100779814 454.907