Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05866 ATGCCCTTATATTTTACTATAAATATACATGATGCTGTTGCCATATATATCATCATAAAGCATTGCAGCTTCTTACACATTAAGAATCAAAACAAAATGGCAGCCATTAGAGCTTCTTACACTGTGATACCAAACGAACCAACTCCACATGGTCGTTTATGGCTCTCTGATATTGATCAAGTAGTACGTATGCGCCACACACCAACTATTTACATTTACAAACCAAACCAGAATCCTGAAAATGCCATTGAAACCTTGAAAACATCTCTCTCCAAAATTCTAGTTCAGTACTATCCTATGGCGGGTAGACTGTGTTACACGGAAGGTGCTAGATTAGAATTGAATCTCAATGCAAAAGGTGCTATTTTGCTTGAGGCTCAAACCAGTAAAACAATTCATGATTTTGGTGACTTTTCACCTTCTGACTCCACCAAAGAGCTTGTTCCAGTAATGGATTATAATCAACCCATTGAAGATATTCCATTATTTGTTGTGCAGCTCACAAGGTTCCAAAACAATGAAGGGTTTGCAATTGGAGTTGCTTTTTTCCATCCTTTATCAGATGGACTTGGAGCTATTAGATTCATCAACTCATGGGCCAAAGTAGCTAGAGGAGAAACACTTGAGGCTAATGAGTTACGTCCCTTTCTTGATAGAACATTACTCAAATTTTCACACACTCCTTTGGCACCTCGTTTTGAGCACATGGAGTTAAAGCCACTACCTCTCATTCTAGGAAGAGAAGACACAAGTGAAGAAAGAAAGAAAAAAACTTCAGCAACATTGTTGAGACTCTCACCAGAACAAGTTGATAAGCTGAAGATAAAAGCCAATGAAAATGATATTCTAGCAATGAAGAAAAAAGGGTCAAGGGCTTTTAGTAGATATGAGGCAATTGGTGCACATTTATGGAGATGTGCATCTAAGGCTCGTGAGCTTGAAGAGAATCAAGAAAGTGTTGTTAGATTCAATGCTGATGTTAGAACAAGGATGATTCCAAATCTTCCTAAAAACTATTTTGGGAATGCTTTGACACAAACAGCAGCAAAAGGGTATGTTGGAGAAATCACATCAAAGCCATTAGGTTATGTTTCACAAATGATAAGGGAAGCTAGTGAGATTGTAACAGATGAATTTATAAGGTCACAAATTGATGTAATTAGGGGATTTGAACATTTGGATGATGCAAGGGCTTTGTTTTTAGGTGAAGGTGAGAATATTCCATATTTTGGGAATCCTAATTTTCATTTAACTAGTTGGATGAGTATGCCTGTTTATGAAGCTGATTTTGGATGGGGAAAGCCTGTTTATTTTGGAATAGCTTATGTGTCTCCCCATGATAGGGCAGTGATTCTTCTTAGTCCTGATGGAGATGGGTCTATTCTTGTGTGTTTGCATTTTCAGAATGCACATTTGGAGCTTTTCAAGAAGTTCTTCTATGGTGATATTTGA 1452 0.3747 MPLYFTINIHDAVAIYIIIKHCSFLHIKNQNKMAAIRASYTVIPNEPTPHGRLWLSDIDQVVRMRHTPTIYIYKPNQNPENAIETLKTSLSKILVQYYPMAGRLCYTEGARLELNLNAKGAILLEAQTSKTIHDFGDFSPSDSTKELVPVMDYNQPIEDIPLFVVQLTRFQNNEGFAIGVAFFHPLSDGLGAIRFINSWAKVARGETLEANELRPFLDRTLLKFSHTPLAPRFEHMELKPLPLILGREDTSEERKKKTSATLLRLSPEQVDKLKIKANENDILAMKKKGSRAFSRYEAIGAHLWRCASKARELEENQESVVRFNADVRTRMIPNLPKNYFGNALTQTAAKGYVGEITSKPLGYVSQMIREASEIVTDEFIRSQIDVIRGFEHLDDARALFLGEGENIPYFGNPNFHLTSWMSMPVYEADFGWGKPVYFGIAYVSPHDRAVILLSPDGDGSILVCLHFQNAHLELFKKFFYGDI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05866 483 Gene3D - 246 481 IPR023213 -
Vivi3g05866 483 Pfam Transferase family 36 479 - -
Vivi3g05866 483 Gene3D - 35 240 IPR023213 -
Vivi3g05866 483 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 42 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05866 Vivi-Chr3 139674509 139676175 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05866 36 480 Monolignol Biosynthesis Gene Families AT5G48930 35.123 1.62e-93 288