Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05865 ATGGTAACCATTACAGCTTCTTACACTGTGATACCAAACGAACCAACTCCACATGGTCGTTTATGGCTCTCTGATATTGATCAAGTCGTACGTATGCGCCACACACCAACTATTTACATTTACAAACCATACCAGAATCCTGAAAATGCCATTGAAACCTTGAAAACATCTCTCTCCAAAATTCTAGTTCAGTACTATCCTATGGCGGGTAGACTGTGTTACACGGAAGGTGCTAGATTAGAATTGAATCTCAATGCAAAAGGTGCTATTTTGCTTGAGGCTCAAACCAGTAAAACAATTCATGATTATGGTGACTTTTCACCTTCTGACTCAACCAAAGAGCTTGTTCCAGTAATGGATTATAATCAACCCATTGAAGATATTCCATTGTTTGTTGTGCAGCTCACAAGGTTCCAAAACAATGAAGGCTTTGCAATTGGAGTTGCTTTTTTCCATCCTTTATCAGATGGACTTGGAGCCATTAGATTCATCAACTCATGGGCTAAAATAGCTAGAGGAGAAACACTTGAGGCTAATGAGTTACGTCCCTTTCTTGATAGAACATTACTCAAATTTTCACACACTCCTTTGGCACCTTGTTTTGAGCACATGGAGTTAAAGCCACTACCTCTCATTCTTGGAAGAGAAGACACAAGTGAAGAAAGAAAGAAAAAAACTTCAGCAACATTGTTGAGACTCTCACCAGAACAAGTTGATAAGCTGAAGATAAAAGCCAATGAAAATGATATTCTAGCAATGAAGAAAAAAGGGTCAAGGGCTTTTAGTAGATATGAGGCAATTGGTGCACATTTATGGAGATGTGCATCTAAGGCACGTGAGCTTGAAGAGAATCAAGAAAGTGTTGTTAGATTCAATGCTGATGTTAGAACAAGGATGATTCCAAATCTTCCTAAAAACTATTTTGGGAATGCTTTGACACAAACAGCAGCAAAAGGGTATGTTGGAGAAATCACATCAAAGCCATTAGGTTATGTTTCACAAATGATAAGGGAAGCTAGTGAGATTGTAACAGATGAATTTATAAGGTCACAAATTGATGTTATTAGGGGATTTGAACATTTGGATGATGCAAGGGCTTTGTTTTTAGGTGAAGGTGAGAATATTCCATATTTTGGGAATCCTAATTTTCATTTAACTAGTTGGATGAGTATGCCTGTTTATGAAGCTGATTTTGGATGGGGAAAGCCTGTTTATTTTGGAATAGCTTATGTGTCTCCGCATGATAGGGCAGTGATTCTTCTTAGTCCTGATGGAGATGGATCTATTCTTGTGTGTTTGCATTTTCAGAATGCACATTTGGAGCTTTTCAAGAAGTTCTTCTATGGTGATATTTGA 1356 0.3783 MVTITASYTVIPNEPTPHGRLWLSDIDQVVRMRHTPTIYIYKPYQNPENAIETLKTSLSKILVQYYPMAGRLCYTEGARLELNLNAKGAILLEAQTSKTIHDYGDFSPSDSTKELVPVMDYNQPIEDIPLFVVQLTRFQNNEGFAIGVAFFHPLSDGLGAIRFINSWAKIARGETLEANELRPFLDRTLLKFSHTPLAPCFEHMELKPLPLILGREDTSEERKKKTSATLLRLSPEQVDKLKIKANENDILAMKKKGSRAFSRYEAIGAHLWRCASKARELEENQESVVRFNADVRTRMIPNLPKNYFGNALTQTAAKGYVGEITSKPLGYVSQMIREASEIVTDEFIRSQIDVIRGFEHLDDARALFLGEGENIPYFGNPNFHLTSWMSMPVYEADFGWGKPVYFGIAYVSPHDRAVILLSPDGDGSILVCLHFQNAHLELFKKFFYGDI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05865 451 Gene3D - 1 208 IPR023213 -
Vivi3g05865 451 Pfam Transferase family 1 447 - -
Vivi3g05865 451 Gene3D - 214 449 IPR023213 -
Vivi3g05865 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05865 Vivi-Chr3 139480862 139482481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05865 2 448 Monolignol Biosynthesis Gene Families AT5G48930 34.292 4.49e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05865 K13065 - gmx:100779814 572.007