Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05852 ATGGTAACCATTACAGCTTCTTACACTGTGATACCAAACGAACCAACTCCACATGGTCGTTTATGGCTCGCTGAAATTGATCAAGTTGTACGTGTTCGATACTTACCCACCATTTACATTTACAAATCAAAACAATGCCAAGAAAATGCCATAGAAACCTTGAAAAACTCTCTCTCCAAAGTTCTTGTTCACTACTATCCTGTGGCTGGTAGACTGTGTTACACGGAAGGTGCTAGATTAGAATTGAATCTCAATGCAAAAGGTGCTATTTTGCTTGAAGCTCAAACCGATAACACTATTCATGATTATGGTGATTTCTCACCTTCGGACTCCACCAGAGAGCTTGTTCCATTAATCGATGATAATCAACCCATTGGAGATATTCCATTATTTGCTGTGCAGCTCACAAGGTTCAAAAACAATGAAGGCTTTGCAATTGGTGTTATTTTTTTCCATCCTTTATCAGATGGACTTGGAGCTATCAGATTCATCAACTCATGGGCCAAAATAGCTAGAGGAGAAACACTTGAGGCTGATGAGTTGCCCTTTTTGGATAGAACATTACTCAAGTTTACACACACTCCATTGGCACCTCGTTTTGAACACATGGAGTTGAAGCCTCTTCCACTCATTCTAGGAAGAACAGACGCAAGTGAAGAAAAAAAGAAGAAAACTTCAGGAACATTATTGAGACTTTCACCGGAACAAGTTGAAGAGTTAAAGAAAAAAGCTAATGAATATGATATGAAGAAAAAAGGGTCTAGGGGTTTTAGTAAATATGAAGCAATTGGTGCACATATATGGAGATGTGCATCTAAGGCACGTGAGCTTGGAGAAAATCAAGAAAGTGTTGTTAGATTTGTTGCTGATGTTAGAACAAGAATAATCCCACCTCTTCCTAAAAACTATTTTGGGAATGCTTTGACACAAACAGCAGCAAAAGGGTATGTTGGAGAAATCACATCAAAGCCATTAGGTTATGTTTCACAAATGTTAAGGGAAGCTATTGAGAGTGTAACAGATGAATTTATAAGGTCACAATTTGATATTATTAGGGGATTTGAACATTTGGATGATGCAAGGGCTTTGTTTTTAGGTGCTGAAGGTAATAATTTTCCATATTTTGGGAACCCTAATTTTCATTTAACTAGTTGGATGAGTATGCCTGTTTATGAAGCTGATTTTGGATGGGGAAAGCCTGCTTACTTTGGAATAGCTCGTGTGTATCCGCATGATAGGGCATTCATTCTTCTCAGTCCTGATGGAGATGGATCTGTTCTTGTTTGTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAAGAAGTTCTTCTATGGTGATATTTGA 1347 0.3801 MVTITASYTVIPNEPTPHGRLWLAEIDQVVRVRYLPTIYIYKSKQCQENAIETLKNSLSKVLVHYYPVAGRLCYTEGARLELNLNAKGAILLEAQTDNTIHDYGDFSPSDSTRELVPLIDDNQPIGDIPLFAVQLTRFKNNEGFAIGVIFFHPLSDGLGAIRFINSWAKIARGETLEADELPFLDRTLLKFTHTPLAPRFEHMELKPLPLILGRTDASEEKKKKTSGTLLRLSPEQVEELKKKANEYDMKKKGSRGFSKYEAIGAHIWRCASKARELGENQESVVRFVADVRTRIIPPLPKNYFGNALTQTAAKGYVGEITSKPLGYVSQMLREAIESVTDEFIRSQFDIIRGFEHLDDARALFLGAEGNNFPYFGNPNFHLTSWMSMPVYEADFGWGKPAYFGIARVYPHDRAFILLSPDGDGSVLVCLHFQIAHLELFKKFFYGDI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05852 448 Gene3D - 213 446 IPR023213 -
Vivi3g05852 448 Pfam Transferase family 1 444 - -
Vivi3g05852 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 442 - -
Vivi3g05852 448 Gene3D - 1 207 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05852 Vivi-Chr3 138889232 138890770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05852 2 445 Monolignol Biosynthesis Gene Families AT5G48930 33.933 1.53e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05852 K13065 - gmx:100778626 548.125