Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05810 ATGGCAACCATATTAGCTTCTTACAGTGTCACTCCAAATGAACCAACTCCAAATGGTTCTTTATGGCTCACTGACTTAGATCAAGTTGTGCGCCTCAGCCATACACCACTTCTTTTCATTTACAAACCAAAACACAACCAAAAAACCAGAATCATTGAAACCTTAAAAAACTCTCTCAGCAAGCTTCTTGTTCATTACTATCCTATGGCTGGTAGATTATGTTACACAAGTGGTGGTAGAATTGAATTGAATCTCAATGCAAAAGGAGCTGTTTTGATAGAAGCTGAAACAACAAAAACAGTGCAGGATTATGGTGACTTTTCACCTTCTGACTCAACAAAAGAGCTTATTCCAAAAATCGATTACAATCAACCCATGGAGGAAATTCCATTGTTTGTAGTTCAAGTCACACGATTCTCAAACAAAGATGAAACTTTTGCATTTGCAATTGGAATTGCTTACTCTCACCCTTTATCTGATGGTGCTGTTTTCTTCAAATTGTTAAATTCATGGGCCAAAATAGCAAGAGGTGAAACACTAGATTCTAATGAAATGCCCTTTTTAGATAGAACAATTCTCAAATTTTCACACACCCCACTTGAACCATGTTTTGAACACATTGAGTTAAAGCCACCACCACTTATTCTAGGAAGATCTGACGCAAACATTGAAAGAAAGAAGAGTATAACAGCTGAATTGTTGAAACTCACGGCAGAAGAAGTTGAAAAGTTGAAGAAAAAAGCTAATGAAATTGATATTCCAGAAGGGTCAAGACCTTTTAGTAGACATGATGCTATAAGTGCACATATATGGAAAAGTGCATCTAAAGCACGTGATCTTGAAACGAAACAAGAAAGTGTTGTAAGATTCTTTGTTGAAATCAGGAATAGAATTATTCCAAATCTTCCAAAGTATTACTATGGGAATGCTTTGATTCAAGCTTCAGCAAGAGGGTATATCGGAGAAATCACATCAAAGCCGTTGAGTTACGTTGCAAAGAAGATAAGGGAAGCACATGAGTTGATAACAAATGAGTATATAAGGTCCCATATTGATGTTATTAGGGGGTTTGAGCATTTGGATGATGCAAGGAAATTGTTTATAGGCAGTGAAGGTAATGATGCTGCATATTTAGGGAATCCTAATCTTCATATAACAAGTTGGATGAATTTTCCTATATACGAAGCGGATTTTGGGTGGGGAAAACCATTCTACTTTGGTATTGGATATGTTTATCCGCATGACAGGGCATGGATTCTATTGAGTCCTGATGGAGATGGTTCTGTTATTGTGTGTGTGCATTTTCAAGTTGAATTGATGCAGCTTTTCAAGAAGTTCTTCTATGAGGATTTATATGAGTTGTTCAGATCTGCACGATTGTGA 1383 0.3666 MATILASYSVTPNEPTPNGSLWLTDLDQVVRLSHTPLLFIYKPKHNQKTRIIETLKNSLSKLLVHYYPMAGRLCYTSGGRIELNLNAKGAVLIEAETTKTVQDYGDFSPSDSTKELIPKIDYNQPMEEIPLFVVQVTRFSNKDETFAFAIGIAYSHPLSDGAVFFKLLNSWAKIARGETLDSNEMPFLDRTILKFSHTPLEPCFEHIELKPPPLILGRSDANIERKKSITAELLKLTAEEVEKLKKKANEIDIPEGSRPFSRHDAISAHIWKSASKARDLETKQESVVRFFVEIRNRIIPNLPKYYYGNALIQASARGYIGEITSKPLSYVAKKIREAHELITNEYIRSHIDVIRGFEHLDDARKLFIGSEGNDAAYLGNPNLHITSWMNFPIYEADFGWGKPFYFGIGYVYPHDRAWILLSPDGDGSVIVCVHFQVELMQLFKKFFYEDLYELFRSARL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05810 460 Gene3D - 218 450 IPR023213 -
Vivi3g05810 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 447 - -
Vivi3g05810 460 Gene3D - 2 211 IPR023213 -
Vivi3g05810 460 Pfam Transferase family 3 449 - -
Vivi3g05810 460 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05810 Vivi-Chr3 136532521 136534144 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05810 4 449 Monolignol Biosynthesis Gene Families AT5G48930 34.452 6.43e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05810 K13065 - gmx:100778626 538.495