Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05808 ATGGTTACCATCAAAGCTTCTTATACTGTCACACCAAGCGAAGCAACTCCTAATGGTTATTTATGGCTCTCAGATTTAGATCAAGTTGTGCGCCTAAGTCACACACCACTTATTTTCATTTACAAACCAAAAGAAAACCATAAAAACAGAATCATTGAAACCTTAAAAAACTCTATCAGCAAGATTCTTGTTCATTATTATCCTATAGCTGGTCGATATTGTTATACAAAAAGCGGTCGACTTGAATTGAATCTCAATGCAAAAGGAGCTGTTTTGACAGAAGCTGAAACGTCAAAAACAGTTGATGAATATGGTGACTTTTCACCTTCTGACTCTACAAAAAAGCTTATTCCAAAAATCGATTATGGTCAACCCATGGAGGAAATTCCATTGCTTGTTGTTCAAGTTACAAGATTCTCTAACAAAGATGATAGCTTTGTATTTTCTATAGGAGTTGCTTACTCTCACCCTTTATCTGATGGTGCTGGTTTTTCAAACTTCTTGAATTCATGGGCCAAAATAGCAAGAGGTGAAACATTAAATTCTAATGAAATACCCTTTTTAGATAGAAAGCTTCTCAAATTCTTACACACTCCTTTGGAACCGCTTTTCGAACACATAGAGTTAAAGCCACCACCACTCATTCTAGGAAGATCTGACGCAAATATTGAAAGAAAAAAGAGTATAACAGCTGAATTGTTGAAACTCACGGCAGAAGAAGTTGAAAAGTTGAAGAAAAAGGCTAATGAATTTTGTATTCCGAAAGGGTCAAGACCTTATAGTAGCTTTGAAGCAATTAGTGCACATATATGGAAAAGTGCATCTAGGGCCCGCGATCTTGAAGAGAATCAACAAAGTGTTGTTAGATTCAATGTTGAAATTAGAAATAGAATAATTCCAAATCTTCCTAAGAATTATTATGGGAATGCTTTGATTCAAACTTCAGCAAAAGGGTTTATCGGCGAAATCACATCAAAGCCTTTGAGTTATGTTGCAATGAAGATAAGAGAAGCAAATGAGTTGATAACAAATGAGTATATAAGATCACAGATTGATGTTATTAGAGGTTTTGAGCATTTGGATGATGCAAGGAAATTGTTTATAGGTGGAGAAGGTAAGAATGCTACATATTTTGGGAATCCTAATCTTCGGATAACAAGTTGGTTGAATTTTCCTGCATATAAAGTTGATTTTGGGTGGGGAAAACCATTTTACTTTGGTATTGGACATGTCTCTCCAGATGATAGGGGAATTATTCTATTGAGTCCTGATGGGGATGGTTCTGTTATTGTGTGTATGCATTTTCAAGTTGATTTGATGGAGCTTTTCAAGAAGATTTTCTATGAGGATTTATATGGGTTGTTCACATCAGCAAGATTGTGA 1383 0.3529 MVTIKASYTVTPSEATPNGYLWLSDLDQVVRLSHTPLIFIYKPKENHKNRIIETLKNSISKILVHYYPIAGRYCYTKSGRLELNLNAKGAVLTEAETSKTVDEYGDFSPSDSTKKLIPKIDYGQPMEEIPLLVVQVTRFSNKDDSFVFSIGVAYSHPLSDGAGFSNFLNSWAKIARGETLNSNEIPFLDRKLLKFLHTPLEPLFEHIELKPPPLILGRSDANIERKKSITAELLKLTAEEVEKLKKKANEFCIPKGSRPYSSFEAISAHIWKSASRARDLEENQQSVVRFNVEIRNRIIPNLPKNYYGNALIQTSAKGFIGEITSKPLSYVAMKIREANELITNEYIRSQIDVIRGFEHLDDARKLFIGGEGKNATYFGNPNLRITSWLNFPAYKVDFGWGKPFYFGIGHVSPDDRGIILLSPDGDGSVIVCMHFQVDLMELFKKIFYEDLYGLFTSARL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05808 460 Gene3D - 218 450 IPR023213 -
Vivi3g05808 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 446 - -
Vivi3g05808 460 Gene3D - 1 211 IPR023213 -
Vivi3g05808 460 Pfam Transferase family 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05808 Vivi-Chr3 136392138 136393771 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05808 2 449 Monolignol Biosynthesis Gene Families AT5G48930 33.482 6.73e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05808 K13065 - gmx:100778626 541.962