Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05697 ATGAAGAAGACGACTGCGGCGGCTCCACACCTAGCGGCGGTGGAAAGCTTTGTCAATGATAATCTATTCTCTAATTTCAAGAGTTTTGCAGCTGAAGATCAACGTGTTTCAGAAAAGGTTATAAAGAGGGCATTTTCTGCAACAGGAGATGATTTTCTGGCTCTTGTGAAGAAGCAATGGCTAACAAAACCGCAGATAGCATCTTCTTTCAGTTCACCGTATTACACTTCTGATACTTGTTATTTTACCGGGATAATTTGCAATGGCATGTTGTATGTTGCAAATACAGAAGATTCGAGAGTCGTGTTACGAAGAGTGAAGAAGGGAACAAAGGAAACATTAGTTGTTCAGTTATCTGCAGAACATAATGTCAACATAGAAACTGAGAGAAACGATGTCCGGTCGAAGCACCCTTACAATCCACATATTGTGGTTATGAAACACTCAGTTTGGCGCGTCAAAGGCATCATACATATTACAGAAAGAGTAGGGGAAGTAGCTTATCGCATTGCTTTACCGCCGATACTTGCGAATTTGCACGATGTGTTTCAGGTATCTCAGTTGAGGAAATACACTGCGGATCCTTCTCTTATGATCCAAGTGGATGATGTACAAGTGAAAGACAATCTGACAGTTGAGGCATCTCCTATGAGGATTGAAGATAGGAAGTTGAAGCAATTACGTGATAAAGAGATAGCGTTGGTCAGAGTAGCTTGGGGAGGACCAACATGTTGA 735 0.4163 MKKTTAAAPHLAAVESFVNDNLFSNFKSFAAEDQRVSEKVIKRAFSATGDDFLALVKKQWLTKPQIASSFSSPYYTSDTCYFTGIICNGMLYVANTEDSRVVLRRVKKGTKETLVVQLSAEHNVNIETERNDVRSKHPYNPHIVVMKHSVWRVKGIIHITERVGEVAYRIALPPILANLHDVFQVSQLRKYTADPSLMIQVDDVQVKDNLTVEASPMRIEDRKLKQLRDKEIALVRVAWGGPTC 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05697 244 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN 94 239 - -
Vivi3g05697 244 Pfam Protein phosphatase 2C 50 169 IPR001932 -
Vivi3g05697 244 Gene3D - 11 214 IPR036457 -
Vivi3g05697 244 ProSiteProfiles PPM-type phosphatase domain profile. 1 244 IPR001932 -
Vivi3g05697 244 SUPERFAMILY PP2C-like 17 171 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05697 Vivi-Chr3 129235200 129282500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05697 17 171 PP2C-type Phosphatase Gene Family AT3G51370 51.613 4.02e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05697 K01102 - vvo:131658951 486.493