Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05679 ATGTTTTTGAGCATTTTCGCTAACTATAGTGATTTGTTTTGTGGAACATTTGCTTTGTATTCTATTGTATGTCGTTATGCCAAAGTGGGACTTCTTCCGAATAACCAAGTAGAGGACACACAGGTGTCTAATTACCAGCTGGGATTGCTAAACCGCCGTCATATGAGAGCTTTCAACCTTAAAACTGTGCTTCAGCGGAGTCACTTTATGAAGATCTTCCTCTTATCTACTACTTTGCTGGGAACTTCCATGGTTATCGGTGACGGTGTTCTCACCCCTTGCATATCTGTATTATCCTGTGTGGGAGGGATCAAGGAACCTGCTAGCAGTATAACCGAGATGATAATCTTGATTGGTCTTTTCATGGTTCAGAGATTTGGAACTGATAAAGTAGTTTTGATGGACATGATGCTTGCTGAAGCTATGTTAATGTTGTCTTTGCAGCTTGCATATGGATGTGTTAAAGCATTGGATTTGGATTAG 483 0.4037 MFLSIFANYSDLFCGTFALYSIVCRYAKVGLLPNNQVEDTQVSNYQLGLLNRRHMRAFNLKTVLQRSHFMKIFLLSTTLLGTSMVIGDGVLTPCISVLSCVGGIKEPASSITEMIILIGLFMVQRFGTDKVVLMDMMLAEAMLMLSLQLAYGCVKALDLD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05679 160 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 134 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vivi3g05679 160 Pfam K+ potassium transporter 14 132 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05679 Vivi-Chr3 127426315 127427137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05679 15 131 Inorganic Solute Cotransporters AT4G13420 55.833 2.52e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05679 K03549 - vvo:131658933 297.36