Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05651 ATGGTTGCGTTAGAAATCCAGGTCCCAACTTCATATGATCCATTTTCCGAAGCGATAGAATCAGACGCTCCTGGAGCGAAAGAGTATGTTCATATACGAATTCAGCAAAGGAACGGAAAAAAGAGTTTAACAACGGTTCAAGGACTGAAGAAAGAGTTCAGCTACCAGAAGATTCTGAAGGATCTCAAGAAAGAGTTCTGCTGCAACGGGAATGTTGTACAGGATAAGGAGCTTGGTAAAGTTATTCAACTTCAAGGTGACCAGAGGAAGAAAGTTTCGCAGTTTTTGGTTCAGGTTGGACTTGTGAGGAAGGATCAGATTAAGATTCATGGTTTTTGA 339 0.413 MVALEIQVPTSYDPFSEAIESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYQKILKDLKKEFCCNGNVVQDKELGKVIQLQGDQRKKVSQFLVQVGLVRKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05651 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Vivi3g05651 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
Vivi3g05651 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Vivi3g05651 112 Gene3D - 1 112 - -
Vivi3g05651 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Vivi3g05651 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Vivi3g05651 112 NCBIfam translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Vivi3g05651 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Vivi3g05651 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05651 Vivi-Chr3 124644360 124645220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05651 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 83.036 3.49e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05651 K03113 - gmx:100791423 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05651 3 124644360 124645220 Vivi3g05651 3 124644360 124645220 ECH
Vivi3g05651 3 124644360 124645220 Vivi7g02746 7 91492693 91493459 PCT