Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05625 ATGGGTTTATGTCCGAACGCCAAGTTCCACAATTTTCAACTCAAGTTGGTATTGAAATTACTACCGTTGAAAAAGAACAAAGGCATTCCGTTAAAAAAAACTCGAGAGGTATTCACGAGGGAAGAGGATATACTTCTTATGCAATCATGGCTTAATGTTTCAAAGCATCCTATTGTGGGAGTTGATCAAAAAGCCGAAGGTTTTTGGTTAAGAATCACCGATAACTATAATCAATATCGTGGGCAGTTGCGAGAAAAGCTACAAGGCCAATTAAAATGCCGATGGCATCGAATAAATGACCTTGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGTAAAAAAAGTGGTCGATCAGAAAAAGATATTTTGGCTAATGCACATGCTTTTTTTCTTCAAGATGAAGGAATAGCATTTAATCTTAAGTATGTGTGGCGTATGTTAAAAGATGAACCTAAATGGATGGGAGCATCAACTAAAAATTCTTCAAAAAGAACAAAGAATTCTGCTAGTGGGGCACACTCATCAAGTTATGAATATAACTCATCGTCACCAATGGAGCGTCCAATGGGGCAACAAGCGGCAAAAAGGAAAAGTAAGGCAAAGGAAAAGAGTCACGTGGCTTTCCAGGTATTTGCATGGAAAGGACAATTTTGTCGAGGTGATCATGGTAAGCCCACAATCATGCTTGAAGAAGTGGCATCACAAGACTTATGGATTTGGCATGCATTTTTTGGTATTGCAGGTTCAAACAATGACATTAATGTGCTAAACCAATTCAATGTGTTTAACGATATTTTGGAAGGACATGCGCCGCAGGGAGAAAAGAGGAAACTATTTGCTCAACATCAAGAATCAGCTAGAAAGGATGTGGAGCGGGCATTTGGAGTGCCCCAATCTCGATTTGCAATTATACGTGGCCCAACGCGTGCCTGGCATATGGAAACCCTCAAGCATACCATATATGCTTGCATCATATTGCACAACATGATTGTTGAAGACGAACGACACACATATGGAGGTGATTTTGATTACTCTTATGATAATGTAGATGACACGTACTCAACAACTGAAACAATTAACGGTCCTCATCCGAATCTTGCAACAAGACTACAAAGAAGAGCAAGTCTTCGTGAAAAACAAGTTCATCGCCAACTTCAAGGAGATCTAGTCGAGCATATTTGGGAACGTTTTGGACATGAGAATGATGAAAATTAA 1224 0.3913 MGLCPNAKFHNFQLKLVLKLLPLKKNKGIPLKKTREVFTREEDILLMQSWLNVSKHPIVGVDQKAEGFWLRITDNYNQYRGQLREKLQGQLKCRWHRINDLVQKFVGCYKQAVNGKKSGRSEKDILANAHAFFLQDEGIAFNLKYVWRMLKDEPKWMGASTKNSSKRTKNSASGAHSSSYEYNSSSPMERPMGQQAAKRKSKAKEKSHVAFQVFAWKGQFCRGDHGKPTIMLEEVASQDLWIWHAFFGIAGSNNDINVLNQFNVFNDILEGHAPQGEKRKLFAQHQESARKDVERAFGVPQSRFAIIRGPTRAWHMETLKHTIYACIILHNMIVEDERHTYGGDFDYSYDNVDDTYSTTETINGPHPNLATRLQRRASLREKQVHRQLQGDLVEHIWERFGHENDEN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05625 407 PANTHER - 32 210 - -
Vivi3g05625 407 MobiDBLite consensus disorder prediction 158 202 - -
Vivi3g05625 407 MobiDBLite consensus disorder prediction 158 191 - -
Vivi3g05625 407 Pfam No apical meristem-associated C-terminal domain 141 208 IPR029466 -
Vivi3g05625 407 Pfam Plant transposon protein 272 341 IPR006912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05625 Vivi-Chr3 122939840 122942441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05625 32 202 Glutathione S-transferase Gene Family AT5G41240 34.392 5.84e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05625 - - vvo:131596753 609.757