Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05619 ATGGGAGGCTTAAGGTTTTTGTTTCAGCAGGCATTGACTGTCAGACAGATTTATCAAATCGGTACTATGTACTGGGATGCCAAGTGTGGAACCCAAAGTGTGTCCAATGAGGTAAATGATCCACCTGTTAGGAATTCACAGGAGGCTTTAATGATGGAGATGTGTGCTGCTAGGATGGTCCAAGCAGCTGATTCTCTACTTAAATTAGTGTCGGAGCTGAAGCAAACTGCAATATTTTTAGGATTTGCTTCCCTTAATGACCATGTAGAACAAAGAAAGGTTGAGTTTAACCAACTTGCAGAAAAAACATACCACACACTATCTAGGATTGGAGAGGAAGCGGCAGCTAGCCTGAAAGAACTTGAGTTCCATTATTCATCTTCTTCACAGAAGACTGTTCAAGATATACAACCTTAA 417 0.4101 MGGLRFLFQQALTVRQIYQIGTMYWDAKCGTQSVSNEVNDPPVRNSQEALMMEMCAARMVQAADSLLKLVSELKQTAIFLGFASLNDHVEQRKVEFNQLAEKTYHTLSRIGEEAAASLKELEFHYSSSSQKTVQDIQP 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05619 138 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22 37 134 IPR009332 GO:0003712|GO:0006357|GO:0016592
Vivi3g05619 138 Pfam Surfeit locus protein 5 subunit 22 of Mediator complex 38 115 IPR009332 GO:0003712|GO:0006357|GO:0016592
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05619 12 38 Myosins gene family AT4G33200 77.778 2.17e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05619 K15139 - gmx:100787657 168.318