LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi3g05571	ATGGTGCATCCGGACAACATTGTGCACGACGACGTAGTGGCTAAAGCGGAAGTTATGTCGATGATCGATGCGGTTGATGTACAGCAACAATTTACAATTGATCGGAGCTTCGGTAGACGCGAACAATTGATTGATTGGGTTCGTAACGAAGCTAGTAAACTTGGATTTGGAATTGTTATTTTAAGGTCTGACAATGGAAATAGTAGGCGGAAAGCTTTTGTTGTTTTGAATTGCGAACGGGGTGTGAGTTATGTACAATCAAACCGGGTGTTAAAACACGAAGACACGGGATCGAGAAAGTGTGGGTGTCCGTTTAAGTTGCGCGCGACTCGGAGGGTTGTTGATTTGTGGCGTTTAACCGTCATTTGTGGAATTCATAATCATGCCTTGGATCCCAAGTTACACAGGCATCCAATGGCGTGTCGTTTGTCCCGTGAAGAGAAGATTGTGATTTCGAATTTATCGATAGTTAAAGTGGCGCCTCGCAACATACTTGCCGATTTGAAACGGAAGAAACCGGATAACGTTTCAAATATCAAGCAAGTTTACAATGAACGACATAATCTCAAAGTTTTGAAAATGGGCCCTCGGGCGGAAATGCAACAACTTTTGAAACTATTGGGCGATAACAAATATGTGTCAAGCTTCCGAACGTCCGAGGACAAAGTTACGGTGCGTGATATTTTTTGGACTCATCCCAAAAGTATCAAATTATTCAACACATTTCCAACCGTTCTTATCATGGATTCGACGTACAAGACAAACAAATATAGGCTTCCTCTTCTAGAGATAGTGGGTGTGACCTCGACGGATAAGACTTATTCGGTCGGGTTTGCTTTTTTGAATTCGCATCGGGACATGTACGCCCGACTATATGAAAATTAA	885	0.426	MVHPDNIVHDDVVAKAEVMSMIDAVDVQQQFTIDRSFGRREQLIDWVRNEASKLGFGIVILRSDNGNSRRKAFVVLNCERGVSYVQSNRVLKHEDTGSRKCGCPFKLRATRRVVDLWRLTVICGIHNHALDPKLHRHPMACRLSREEKIVISNLSIVKVAPRNILADLKRKKPDNVSNIKQVYNERHNLKVLKMGPRAEMQQLLKLLGDNKYVSSFRTSEDKVTVRDIFWTHPKSIKLFNTFPTVLIMDSTYKTNKYRLPLLEIVGVTSTDKTYSVGFAFLNSHRDMYARLYEN	294

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi3g05571	294	PANTHER	MALONATE-SEMIALDEHYDE DEHYDROGENASE	73	190	IPR010061	GO:0004491
	Vivi3g05571	294	Pfam	MULE transposase domain	245	288	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi3g05571	Vivi-Chr3	119380669	119384973	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vivi3g05571		MULE	6.7e-09	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi3g05571	-		-	vvo:131620442	499.975