Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05570 ATGTTAGGTATGGTGCATCCGGACAACATTGTGCACGACGACGTAGTGGCTAAAGCGGAAGTTATGTCGATGATCGATGCGGTTGATGTACAGCAACAATTTACAATTGATCGGAGCTTCGGTAGACGCGAACAATTGATTGATTGGGTTCGTAACGAAGCTAGTAAACTTGGATTTGGAATTGTTATTTTAAGGTCTGACAATGGAAATAGTAGGCGGAAAGCTTTTGTTGTTTTGAATTGCGAACGGGGTGTGAGTTATGTACAATCAAACCGGGTGTTAAAACACGAAGACACGGGATCGAGAAAGTGTGGGTGTCCGTTTAAGTTGCGCGCGACTCGGAGGGTTGTTGATTTGTGGCGTTTAACCGTCATTTGTGGAATTCATAATCATGCCTTGGATCCCAAGTTACACAGGCATCCAATGGCGTGTCGTTTGTCCCGTGAAGAGAAGATTGTGATTTCGAATTTATCGATAGTTAAAGTGGCGCCTCGCAACATACTTGCCGATTTGAAACGGAAGAAACCGGATAACGTTTCAAATATCAAGCAAGTTTACAATGAACGACATAATCTCAAAGTTTTGAAAATGGGCCCTCGGGCGGAAATGCAACAACTTTTGAAACTATTGGGCGATAACAAATATGTGTCAAGCTTCCGAACGTCCGAGGACAAAGTTACGGTGCGTGATATTTTTTGGACTCATCCCAAAAGTATCAAATTATTCAACACATTTCCAACCGTTCTTATCATGGATTCGACGTACAAGACAAACAAATATAGGCTTCCTCTTCTAGAGATAGTGGGTGTGACCTCGACGGATAAGACTTATTCGGTCGGGTTTGCTTTTTTGAATTCGCATCGGGACATGTACGCCCGACTATATGAAAATTAA 894 0.4251 MLGMVHPDNIVHDDVVAKAEVMSMIDAVDVQQQFTIDRSFGRREQLIDWVRNEASKLGFGIVILRSDNGNSRRKAFVVLNCERGVSYVQSNRVLKHEDTGSRKCGCPFKLRATRRVVDLWRLTVICGIHNHALDPKLHRHPMACRLSREEKIVISNLSIVKVAPRNILADLKRKKPDNVSNIKQVYNERHNLKVLKMGPRAEMQQLLKLLGDNKYVSSFRTSEDKVTVRDIFWTHPKSIKLFNTFPTVLIMDSTYKTNKYRLPLLEIVGVTSTDKTYSVGFAFLNSHRDMYARLYEN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05570 297 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 76 193 IPR010061 GO:0004491
Vivi3g05570 297 Pfam MULE transposase domain 248 291 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05570 Vivi-Chr3 119380669 119384973 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g05570 MULE 6.8e-09 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05570 - - vvo:131620442 499.975