Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05542 ATGGCATCAACAACGACATCAGCGGCATCAATGCTTCTCTCAGGACCAATGACAAGTACCGATGGTTTGATAAATCCAACAATGTTAGAAAGTACATTATTCCCTTGTTCACAATACATAACACTCTCGGCTTCTGCTCCATTTCCAACTATAACATTAGATCTCACTCAAAATCCTACCAACAATTCATTACAGGGTCAATTTAACCTCTTTCAACCTATTTTGACTCAAAAATTTATGCCAACTTCAAATATGTTGGGAATGGAAAATGTTTCATTTCCGGACAGAGTTTGTGCAGCAACAACTGCTATGACTTCTGATCCAAAATTCCCAGGTGCTCTTGTGGCTGCAATAACTTCTATTATTGAAAGTAATTCAAATTGCGACATTAGTGGTATTGCCAATGGTATAAGGGAAGACAACTATTGCAATAATTCTCAGTGA 444 0.3739 MASTTTSAASMLLSGPMTSTDGLINPTMLESTLFPCSQYITLSASAPFPTITLDLTQNPTNNSLQGQFNLFQPILTQKFMPTSNMLGMENVSFPDRVCAATTAMTSDPKFPGALVAAITSIIESNSNCDISGIANGIREDNYCNNSQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05542 147 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 125 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05542 Vivi-Chr3 117374171 117374614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05542 1 122 WRKY Transcription Factor Family AT4G04450 45.890 2.86e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05542 - - vvo:131658854 288.115