Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05517 ATGGCCTTGTTCATAAATTTGTTGGGTGTTACAAACAAGCTGTTCGTGAAAAAAAGTGGGGCATCAGAGAAAGATATCTTAGTCAATGTACATGCTTTTTTTGAACAAGATGAATGTGCACCATTCAATCTTGAGTATGCATGGCGGATTTTAAAAGATGAACCTAAATGGATGGGAGCATCCACCGGAAATTCTTCAAAGAGAACAAAGAATTCTGTTAGCGGTGCATACACGACATCGCCAAACTCAGAGACACCTTCAAGTTATGAGTTTAACTCATCATCTCCAAGGGAGCGTCCATTGGGACAAAAGGAGGCAAAACGAAAAGGTAAGGCAAAGGAAAATTCAAATGCAACTGAACCTCCTTCTAGTGTTCGAATTGGTGAAAGTACTGCAATTGAGTTCTTAGAGAGATTCGTAAGGGGCGTGAATGAGGTATTTGGGGCCGAGTATTTAAGAAGGCCTAATAACAATGATGTTGAGCATCTTTTACAAATGGGGGAGTCACGTGGATTTCCAAGCATGCTAGGTTCCATTGATTGTTCAAACAATGACATTAATGTGCTAAACCAATCCAATGTGCTTAACGATATTTTGGAAGAACGTGCTGCTACTGTGCAATATACAATCAATGGGACTCTACATAATATGGGGTATTATTTAGCGGATGCGCGTGCTTGGCACATAGAAACCCTCAAGCATACCATATATGCTTGCATCATATTGCACAACATGATTGTCGAAGACGAACGACACACATATGGAGGTGATTTTGATTACTCTTATGATAATGCATGTAACAACAACTCAACGACCGAAACATTTAACGGTCCTCATCCGAATCTTGCAACAAGAATACAAAGAAGAGCAAGTCTTCGTGAAAAACAAGTTCATCGCCAACTTCAAGGAGATTTAGTCGAACATAATTGGGAACGTTTTGGACACGAGGATGAAGAAATTTAA 963 0.3977 MALFINLLGVTNKLFVKKSGASEKDILVNVHAFFEQDECAPFNLEYAWRILKDEPKWMGASTGNSSKRTKNSVSGAYTTSPNSETPSSYEFNSSSPRERPLGQKEAKRKGKAKENSNATEPPSSVRIGESTAIEFLERFVRGVNEVFGAEYLRRPNNNDVEHLLQMGESRGFPSMLGSIDCSNNDINVLNQSNVLNDILEERAATVQYTINGTLHNMGYYLADARAWHIETLKHTIYACIILHNMIVEDERHTYGGDFDYSYDNACNNNSTTETFNGPHPNLATRIQRRASLREKQVHRQLQGDLVEHNWERFGHEDEEI 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05517 320 MobiDBLite consensus disorder prediction 60 126 - -
Vivi3g05517 320 PANTHER OS12G0169200 PROTEIN 224 260 - -
Vivi3g05517 320 MobiDBLite consensus disorder prediction 60 99 - -
Vivi3g05517 320 Pfam No apical meristem-associated C-terminal domain 41 114 IPR029466 -
Vivi3g05517 320 MobiDBLite consensus disorder prediction 100 115 - -
Vivi3g05517 320 Pfam Plant transposon protein 182 223 IPR006912 -
Vivi3g05517 320 Pfam Plant transposon protein 224 254 IPR006912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05517 Vivi-Chr3 115682125 115683383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05517 17 111 Glutathione S-transferase Gene Family AT5G41240 34.653 1.64e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05517 - - vvo:131658842 656.751