Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05459 ATGGGTTTCTTGATAACGACACTGATTTTCGTGGTGGTTGGGTTCATCGCGTGTCTCTGCACCAGAATTTGCTGCAATCGAGGACCTTCTGCTAATCTATTTCACTTAACTCTGGTTACTACTGCAACAATATGCTGCTGGATGATGTGGGCGATTGTATATCTGGCACAAATGAAACCACTCATCGTACCTATACTAAGTGAAGGCGAATAA 213 0.4319 MGFLITTLIFVVVGFIACLCTRICCNRGPSANLFHLTLVTTATICCWMMWAIVYLAQMKPLIVPILSEGE 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05459 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 68 IPR008389 GO:0033179|GO:0046961|GO:1902600
Vivi3g05459 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05459 Vivi-Chr3 113133052 113135906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05459 1 70 Primary Pumps ATPases(2) AT5G55290 85.714 1.35e-39 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05459 K02153 - gmx:100527598 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05459 3 113133052 113135906 Vivi3g05459 3 113133052 113135906 ECH