Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05338 ATGGAGCTAGAACCCAAAATGATTTCATCTCCCATCTTCTTATCTTTCTTCTTTTTATTCATAATAATCATCCTAATATGGAATTCAACAAAACCAAAATCTTCAAACTCCAAGTTACCCCCAGGACCACCAAAACTACCTCTTATAGGAAACATACACCAACTTGGTTCAGTGCCTCATCATAGCCTCAAAAAACTCTCACAAAAATATGGACCATTAATGCACATCAAACTAGGTCAAATTCCAATCATAGTTGTATCTTCACCAGAAATCGCCAAACAAATAATGAAAACACATGACACCAAATTCTCAAACAGGCCACATCTTGTAGCTGCTGATATCATAACTTATGGTACAAAAGGCATAACATTTTCACCTTACGGAAGTTATTGGAGACAAATGAGAAAAATCTGCACCTTTGAACTGTTAACACCGAAGCGCGTTGAATCGTTTCGATCGATTCGGGAACATGAGGTGTCAAATATTATGGAAAAGATAAGGTTGAATGAAGGGTCATCTATTAATCTTACCAAGAAGATTGGTTTGTTTTCTTATGGCTTAACATCAAGGATTGCATTAGGAGCAAAATCTGAAGATCAAGAAGCATTTATGGTTGCTATGAAGGATGTTTTGAAGCTAATTGGTGGGTTTTCTGTGGCTGATTTGTTTCCTTCTTTTAAAGTGCTTCATGGTTTGACAGGTATAAGGACTAAATCTGAGAAGGTGCATAGAGAAATAGATAGGATTCTTGAGAAAATTCTTGGATATCATAAAGTGGATACTATTTTAGAAACAAAGGTAATCAATGAAAAAGATGGTGAAGATTTAGTTGGTGTGCTGCTAAGGCTTCAGAAAGAGAATAACCTTGAGCATCCTCTATCTGATAGTGTTATTAAAGCAAACATGTTGGATATATTTAGTGCTGGAAGTGGTACATCATCCAAAGCTTCAGAATGGGCAATGTCAGAACTTATTCGAAACCCAACCGTGATGAAAAAAGCACAAACTGAGGTAAGAAGTGTTTTTGATGCAAAAGGGTATGTAGATGAAGCAAACATTCAAGAACTAAAGTACTTAAAGTTAGTTATAAAAGAAACCTTGCGTCTACATGGTCCGGTTCCACTGTTACTACCAAAGGAATGCAGTGAAAGATGTGAAATAAATGGATATGAGATACCGGCGAAGACAAAGGTCATAGTTAATGCTTATGCAATTGGAATGGATCCAAACTATTGGAATGAACCTACGAAGTTTTATCCGGAAAGGTTTGTTGATAGTGAAGTTGATTACAAAGGTGTGGATTTTCAGTTTATTCCGTTTGGTGCTGGAAGAAGGATGTGTCCTGGTATAACATTTGGTGTTGTTAATGTTGAAATATTATTGGCGAATTTGCTTTTTCATTTTGATTGGAAAATGGTTGATGGAAAAAAGGGTGAAGAACTTGATATGACTGAATCATATGGTTTGACTCTAAAAAAGAAACATGATTTGTACTTGATTCCTATTATGTATCATTCATCTCTGAAGTCCTAA 1533 0.3568 MELEPKMISSPIFLSFFFLFIIIILIWNSTKPKSSNSKLPPGPPKLPLIGNIHQLGSVPHHSLKKLSQKYGPLMHIKLGQIPIIVVSSPEIAKQIMKTHDTKFSNRPHLVAADIITYGTKGITFSPYGSYWRQMRKICTFELLTPKRVESFRSIREHEVSNIMEKIRLNEGSSINLTKKIGLFSYGLTSRIALGAKSEDQEAFMVAMKDVLKLIGGFSVADLFPSFKVLHGLTGIRTKSEKVHREIDRILEKILGYHKVDTILETKVINEKDGEDLVGVLLRLQKENNLEHPLSDSVIKANMLDIFSAGSGTSSKASEWAMSELIRNPTVMKKAQTEVRSVFDAKGYVDEANIQELKYLKLVIKETLRLHGPVPLLLPKECSERCEINGYEIPAKTKVIVNAYAIGMDPNYWNEPTKFYPERFVDSEVDYKGVDFQFIPFGAGRRMCPGITFGVVNVEILLANLLFHFDWKMVDGKKGEELDMTESYGLTLKKKHDLYLIPIMYHSSLKS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05338 510 CDD CYP71-like 69 497 - -
Vivi3g05338 510 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PANTHER OS08G0105600 PROTEIN 61 505 - -
Vivi3g05338 510 Pfam Cytochrome P450 40 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 SUPERFAMILY Cytochrome P450 40 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vivi3g05338 510 FunFam Cytochrome P450 71D8 32 501 - -
Vivi3g05338 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05338 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05338 Vivi-Chr3 109328022 109330421 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05338 15 503 Cytochrome P450 AT5G25180 41.851 2.54e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05338 - - gmx:100818000 691.419