Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05336 ATGGATCTTCAAGCAATTTTCCCTACCACCCTTTTAACAATTTTCTTCCTCTCCATCATTGTGACACTAAAACTAAAGAAGAAAACAAAAAAAGTTTCCTCAATTCCAAATATACCACCAGGGCCATGGAAGCTACCTATCATAGGAAACATAGCCAATCTTCTTGGCTCTCCACCACATAGAAAACTAAGAGATTTGGCAAAAAAGTATGGACCCTTGATGCATCTTCAACTTGGTGAAGTTTTCTTTATTATTGTTTCATCAGCAGAATATGCTAAAGAAATAATGAAAACTCATGATGTCATATTTGCATCAAGGCCTGCAAATCTTACCTCAGAGATAATCTTTTATGATTCAACAGATATAGCTTTTGCACCTTATGGTGAGTATTGGAGACAACTTAGAAAGATTTGTACCATTGAACTTCTAAGTGTAAAACGTGTGCAATCTTTTTGGCCTATAAGAGAACAAGAGATGAGTAATCTTATCAAAAGAATCGCTTCGGAAGAAGGAAGAGTGGTCAATCTTTCTCAACAAGTTGTGTCAATGATGTTTTCGTTCACTTCACGAGCGGCGTTTGGCAAGAAATACATGGAGCAAGACGAGTTCATATCGGCGGTAAGAGAAATTTTGCAGCTTGCTTCTGGTTTTTTCATTGGTGACTTGTTTCCGTCGGCGAAATGGCTTCAAAATGCAACTGGTATGAGGCCTAAGCTTGAGAAGTTGCATAAGAAAGTTGATAGAATATTTGAGATGATTATAAATGATCATAAAGAGAAAAAGACAAGAGGTATAGATGGTTTAGTTGAAGGACATGAGGATTTGATTGATGTTCTCTTGAAATTTGAGGAAAATAACAGCACTAATCAGAATCAGGAATTTTCCTTAACTAAGAATAATATCAAGGCTATACTCTTTGATATCTTCACTGGTGGAAGTGACACAGCAGCAACAACAATCAACTGGGCAATGGCAGAAATGATGAAAAATCCAAGAGTATTGCAGAAAGCACAAGCAGAAGTAAGAAATACATTTAAAAAAACCGGAAAACTCGATGAAACATGCCTTGAAAATTTAAAATACTTAAAAGCAATAATCAAAGAAGTCCTAAGAATCCACCCTCCAGGTCCACTATTAATCCCAAGAGAATGTGCACAAGATATTGAGATAAATGGCTATCACATACCAAAAAAAAGCAAAGTGATAATCAATGCATGGGCCATTGGAATGGACACAAAGTACTGGAAAGAGCCAGAGAGGTTTTATCCAGAGAGGTTTGTTGACAGTTGTGTGGATTATAAAGGGAATAGTTTTGAGTATATTCCGTTTGGTGCTGGGAGGAGAATTTGTCCTGGGATGAATTATGGTATGGCGAACGTTGAATTGGCTCTTGCTATGTTGTTGTATGAGTTTGATTGGAGAGTTGGTGATGGGGTGAAATGTGAGGATTTGGATATGAGTGAGATGTTTGGTGCTTCTGTTATAAGAAAAGATGATTTGTATTTGGTTCCGACTGTTTATTCTGAAGTGTAG 1533 0.3692 MDLQAIFPTTLLTIFFLSIIVTLKLKKKTKKVSSIPNIPPGPWKLPIIGNIANLLGSPPHRKLRDLAKKYGPLMHLQLGEVFFIIVSSAEYAKEIMKTHDVIFASRPANLTSEIIFYDSTDIAFAPYGEYWRQLRKICTIELLSVKRVQSFWPIREQEMSNLIKRIASEEGRVVNLSQQVVSMMFSFTSRAAFGKKYMEQDEFISAVREILQLASGFFIGDLFPSAKWLQNATGMRPKLEKLHKKVDRIFEMIINDHKEKKTRGIDGLVEGHEDLIDVLLKFEENNSTNQNQEFSLTKNNIKAILFDIFTGGSDTAATTINWAMAEMMKNPRVLQKAQAEVRNTFKKTGKLDETCLENLKYLKAIIKEVLRIHPPGPLLIPRECAQDIEINGYHIPKKSKVIINAWAIGMDTKYWKEPERFYPERFVDSCVDYKGNSFEYIPFGAGRRICPGMNYGMANVELALAMLLYEFDWRVGDGVKCEDLDMSEMFGASVIRKDDLYLVPTVYSEV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05336 510 PANTHER OS08G0105600 PROTEIN 62 508 - -
Vivi3g05336 510 SUPERFAMILY Cytochrome P450 39 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 Gene3D Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 CDD CYP71-like 69 500 - -
Vivi3g05336 510 FunFam Cytochrome P450 71D8 31 504 - -
Vivi3g05336 510 Pfam Cytochrome P450 39 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05336 510 Coils Coil 159 179 - -
Vivi3g05336 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05336 Vivi-Chr3 109148655 109150782 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05336 14 504 Cytochrome P450 AT3G26310 40.361 1.35e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05336 - - gmx:100801936 659.448