Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05333 ATGGCTCTTCAAATTCTCAACTTCTTCACCCTTTTTGCTATTTTTATGTTCATGATCATTGCATTAAAAATTAAGAATCATTGTAAAAAATATGATTCAAATACTAAAAAAATACCCCCGGGGCCATGGAAGTTACCAATTATAGGCAATATTCACAATCTTGTTACAACAAACCCACCTAGAAAATTAAGAGATTTAGCAAAAATTTATGGACCCTTGATGCATCTCCAACTTGGCGAGATCTTCTTCGTAGTTGTTTCATCACCAGAAATTGCTAGGGAGGTCCTGAAAACACATGATATTATCTTTGCATCAAGGCCTCATCTTCTAGTCACAGAAATAGCTGCTTATAATTCAACGGATATAGCTTTTTCCCCTTATGGTGATTACTGGAGACAACTCAGAAAGATTTGTGCTACTGAGCTTTTGAGCACAAGAAGGGTTAAAACTCTTTGGCCTGTAAGAGAGAAAGAGATCAACTCTCTCTTAAGAAAGATTTCTTCAAATGAAGGAACAGAATTCAATCTTACTCAAGCAGTTATTTCAATGATGTATACTTTCACTTCAATGGCGGCGTTTGGTAAGAAATATTCAGAACAAGAAGAATTCATATCAATTGTAAAACAACTTATAAAACTTGCTGGAGGGTTCTATATCGGTGACTTGTTTCCTTCAGCTAAATGGATTCAAAATTTCTCTGGAATGAGGCCTAAGCTTGAGAAGTTAAGCCAACAAGTAGACAGGATATTAGAACATATCATCGATGACCATAAAGAAACAAGATCAAGAAGAGATAAACAAGGTCTGCCTGAAGAAGATGAAGATCTGATCGATAGTCTTTTGAAATTTCACGACAACGACAGGGATACGGATTTTCATTTAACTTCTGATAATGTCAAGGCCATAATTTTGGATATGTTCACTGGTGGAAGTGACACAGCAGCATCTCTTATTAACTGGACAATGGCTGAGATGTTGAAGGATACTAGAGTTTTGAAGAAAGCACAAGCTGAAGTGAGAGAAGTGATTAATAAGAGAGGAAAGATCGATGAAGCTACGTTTGAAGAATTCAACTATTTAAAAGCAGTAATCAAAGAGTCACTAAGATTACACCCTTCTGTTCCTCTCCTTCTTCCAAGGGAAAATAGTCAAGCTGTTGAGATTAATGGCTATGACATACCTGAAAAAAGTAGGGTCATAGTTAATGCTTGGGCCATTGGAAAGGATCCAAATTATTGGATTGAGCCAGATAAGTTTTATCCTGAAAGGTTTATTGATAGTTTGATTGAGTACAAGGGAAATAATTTTGAGTACATTCCATTTGGTGCTGGAAAGAGAATTTGTCCGGGCATGAAGTATGGTTTGGCTAATACTGAGCAGGTTCTTGCACTTTTATTGTATCATTTTGATTGGAAGCTGCCCAATGGTATGAAAAATGTGGAATTGGAGATGGCAGAAGAGTTTGGAATTAATATGTCAAGAAAAGGCGACCTACACTTGATTCCCATCACTTCTCATCAGTTGCTTGTAATATAA 1536 0.3633 MALQILNFFTLFAIFMFMIIALKIKNHCKKYDSNTKKIPPGPWKLPIIGNIHNLVTTNPPRKLRDLAKIYGPLMHLQLGEIFFVVVSSPEIAREVLKTHDIIFASRPHLLVTEIAAYNSTDIAFSPYGDYWRQLRKICATELLSTRRVKTLWPVREKEINSLLRKISSNEGTEFNLTQAVISMMYTFTSMAAFGKKYSEQEEFISIVKQLIKLAGGFYIGDLFPSAKWIQNFSGMRPKLEKLSQQVDRILEHIIDDHKETRSRRDKQGLPEEDEDLIDSLLKFHDNDRDTDFHLTSDNVKAIILDMFTGGSDTAASLINWTMAEMLKDTRVLKKAQAEVREVINKRGKIDEATFEEFNYLKAVIKESLRLHPSVPLLLPRENSQAVEINGYDIPEKSRVIVNAWAIGKDPNYWIEPDKFYPERFIDSLIEYKGNNFEYIPFGAGKRICPGMKYGLANTEQVLALLLYHFDWKLPNGMKNVELEMAEEFGINMSRKGDLHLIPITSHQLLVI 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05333 511 FunFam Cytochrome P450 99A2 28 503 - -
Vivi3g05333 511 PANTHER CYTOCHROME P450 71B11-RELATED 18 503 - -
Vivi3g05333 511 Gene3D Cytochrome P450 31 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vivi3g05333 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 Pfam Cytochrome P450 39 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 CDD CYP71-like 70 498 - -
Vivi3g05333 511 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05333 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05333 Vivi-Chr3 109047913 109050331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05333 27 506 Cytochrome P450 AT3G26270 40.121 3.52e-124 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05333 - - gmx:102665189 641.728