Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05330 ATGGCTCTTTTATTCCTCTACTCTGCATATCTTTTCTCCTTTGTCCTCTTAACTATTATGGTTCAGAAGATGAGAAAGAAGAAAAGTTACTCAACTAATAACATACCACCAGGACCTAAAAAGCTACCTATTATAGGAAATATACACAATCTGTTAAGCTCTCAACCCCATCGAAGATTAAGAGATTTGGCCAAAAATTATGGACCTGTGATGCATCTTCAACTTGGAGAGGTTTCTACAATTGTCATTTCGTCGCCCGAGTTTGCCAAAGAGGTAATGAAAACTCATGATATTAACTTTGCAACAAGGCCTCAAATCCTAGCTTCAGAAATAATGTCTTACAATTCAACAAATATAGCTTTTGCTCCTTATGGTAGTTATTGGAGACAGTTGCGAAAAATATGCACATCGGAACTTTTGAGCCTAAAAAGAGTAAACTCGTATCAATCAATTAGAGATGACGTGCTTTCAGATCTTGTCAAATGGATTGCTTCACATAATGGATCTCCAATCAATCTAACTGAAGCTGTAATCTCTTCGATATTTACTATTGTTTCGAGGGCCGCCTTTGGCAGTAAATGCAAAGACCAAGAAGAATTTATATTTGTGGTAAAAGAAGCAATCAAGGTTGCAGGAGGTTTTGACTTGGGAGATTTATTTCCTTCTGCTAAATGGATACAACGTGTTACTGGTTTGAGGCCTAAGCTTGAGAGGTATCATCGACAAACTGATCAGATTTTTGAAAACATTATCAACGATCATAAAGGAGAAAAGTACAGAAAATCCAAAGACTATCAAGGCGATGATGTAGAAGAAGATCTGGTAGACGTTCTCTTAAAATATGAGGATGGGAGCAACAAGGATTTTTCCTTAACAAAAAACAACATCAAGGCTATAATCCTAGACATTTTCGGTGCTGGAGGCGAGACATCAGCAAGCACCATAGATTGGGCAATGGCAGAAATGATAAGGGATCCAAGAATAATGAAGAAAGCACGAGATGAGGTGAGAGAGGTTTTCAAAATTAAAGGAAGGGTTGATGAAAATTGCCTCAATGAACTCAACTATTTGAAATCAGTAGTGAAAGAAACATTAAGGCTACACCCTCCAGCACCTCTTCTGCTACCAAGAGAATGTGGTGAAGCCTGTGAGATAAACGGCTTTCACATACCGATTAAAACTAAGGTGATAATCAATGCTTGGGCAATTGCAAGAGATCCAAACTATTGGACTGAGCCAGAGAGGTTTTATCCAGAGAGATTCATTGACAGCGCTATTGACTATAAAGGGAGTAATTTTGAGTACATTCCATTTGGTTCTGGAAGAAGAATATGCCCAGGGAGCACATTTGGTTTGAGAAATGTTGACCTTACTCTTGCAATGTTGTTGTATCATTTTGACTGGAAGCTTCCGAGTGGAATCAAAAGTGATGAATTGAACATGACAGAGCAATTTGGAGTCACGCTTTAA 1470 0.3816 MALLFLYSAYLFSFVLLTIMVQKMRKKKSYSTNNIPPGPKKLPIIGNIHNLLSSQPHRRLRDLAKNYGPVMHLQLGEVSTIVISSPEFAKEVMKTHDINFATRPQILASEIMSYNSTNIAFAPYGSYWRQLRKICTSELLSLKRVNSYQSIRDDVLSDLVKWIASHNGSPINLTEAVISSIFTIVSRAAFGSKCKDQEEFIFVVKEAIKVAGGFDLGDLFPSAKWIQRVTGLRPKLERYHRQTDQIFENIINDHKGEKYRKSKDYQGDDVEEDLVDVLLKYEDGSNKDFSLTKNNIKAIILDIFGAGGETSASTIDWAMAEMIRDPRIMKKARDEVREVFKIKGRVDENCLNELNYLKSVVKETLRLHPPAPLLLPRECGEACEINGFHIPIKTKVIINAWAIARDPNYWTEPERFYPERFIDSAIDYKGSNFEYIPFGSGRRICPGSTFGLRNVDLTLAMLLYHFDWKLPSGIKSDELNMTEQFGVTL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05330 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vivi3g05330 489 Gene3D Cytochrome P450 28 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 Pfam Cytochrome P450 36 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PANTHER OS08G0105600 PROTEIN 59 488 - -
Vivi3g05330 489 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 SUPERFAMILY Cytochrome P450 36 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05330 489 FunFam Cytochrome P450 71D8 28 489 - -
Vivi3g05330 489 CDD CYP71-like 67 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05330 Vivi-Chr3 109003432 109005605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05330 6 489 Cytochrome P450 AT3G26300 41.851 8.35e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05330 - - tpra:123912942 786.178