Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05327 ATGGCTCTACTAGTCCTCTACTCTGCATATCTTTTCTCCTTTGTTCTCTTAGTCCTTATAGTACAAAAGATAACAAAGAAGAAAAACTACTCGACTTATAACTTACCGCGAGGACCTAGAAAGCTCCCGATTATAGGAAATATACACAATTTGTTAAGCTCTCAACCCCATCGAAGATTAAGAGATTTGTCCGAAAAATATGGACCTGTGATGCATCTTCAACTTGGAGAGGTTTCTACTATTGTCATTTCATCGCCTGAATGTGCCAAAGAGGTAATGAAAACCCATGATATTAACTTTGCATCAAGGCCTCATCTCCTAGCTTCAGAAATAATGTCTTATAATTCGACGAATATAGCTTTTGCTCCTTATGGTAGTTATTGGAGACAGTTACGAAAAATATGTACGTCCGAGCTTTTAAGCCTGAAACAGGTGAACTCGTTGCAACCGATTAGAGAAGAGGTGCTCTCCAATCTTGTCAAATGGATTGCTTCACGGAATGGATCGCAGATCAACCTGACCGAAGCTGTGATTTCTTCAATATACAGTCTTGTTTCGAAGTCTGCGTTTGGAAATAAGTGCAAAGACCAGGAAAAATTTATATCTGTGGTGAAGGAATCTATAAAGGTTTCTGCGGGTTTTGACTTGGGAGATTTGTTTCCTTCTGCTAAATGGATACAACGTGTTACCGGTTTGAGGCCTAAGCTTGAGGGGTATCAGCGACAAACTGATCAGATATTTGAAAACATTATCAATGACCATAAAGGCCAATTGTACACAGAAGCCAAAGATGATCAAGGCGATTTAGAAGAAGATCTCGTAGACGTTCTCTTAAAATATGAGAATGGCAGCAACAAGGATTTTTCCTTAACAAAAGACAATATCAAAGCCATAATCATGGACGTTTTTGGGGCGGGAAGTGAGACATCAACAAGCACAATAGATTGGGCAATGGTAGAAATGGTAAGGGATCCAAGAATAATGAAGAAAGCACAAGCTGAGGTAAGAGAGGTTTTCAAAACGAAAGGAAGGGTCGACGAAAATCACATCGATGAACTCGATTATTTGAAATCAATTGTCAAAGAAACATTAAGGTTACACCCTCCAGCACCCCTTTTGCTACCAAGAGAATGTGGTGAAGCCTGTGAGATAAACGGATTTCACATACCGATTAAGACTAAGGTGATAATCAATGCTTGGGCTATTGCAAGAGATCCAAACTACTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGACAGCACTATTGACTATAAAGGGAGTAACTTTGAGTACATTCCTTTTGGTTCTGGAAGAAGAATATGCCCCGGGATCACATTTGGTTTGAGAAATATAGAGCTAGCCCTTGCAATGTTGTTGTATCATTTCGACTGGAAGCTTCCTAGTGGAACCAAAAGTGAAGAATTGGACATGACTGAGCAATTTGGAGTCACTGTGAGAAGGAAAGATGATCTTTTATTGTTACCTTTTGTTTATCATCCTTTAAATGTTACATGA 1524 0.3924 MALLVLYSAYLFSFVLLVLIVQKITKKKNYSTYNLPRGPRKLPIIGNIHNLLSSQPHRRLRDLSEKYGPVMHLQLGEVSTIVISSPECAKEVMKTHDINFASRPHLLASEIMSYNSTNIAFAPYGSYWRQLRKICTSELLSLKQVNSLQPIREEVLSNLVKWIASRNGSQINLTEAVISSIYSLVSKSAFGNKCKDQEKFISVVKESIKVSAGFDLGDLFPSAKWIQRVTGLRPKLEGYQRQTDQIFENIINDHKGQLYTEAKDDQGDLEEDLVDVLLKYENGSNKDFSLTKDNIKAIIMDVFGAGSETSTSTIDWAMVEMVRDPRIMKKAQAEVREVFKTKGRVDENHIDELDYLKSIVKETLRLHPPAPLLLPRECGEACEINGFHIPIKTKVIINAWAIARDPNYWTEPERFYPERFIDSTIDYKGSNFEYIPFGSGRRICPGITFGLRNIELALAMLLYHFDWKLPSGTKSEELDMTEQFGVTVRRKDDLLLLPFVYHPLNVT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05327 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 Gene3D Cytochrome P450 28 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g05327 507 CDD CYP71-like 66 494 - -
Vivi3g05327 507 FunFam Cytochrome P450 71D8 28 498 - -
Vivi3g05327 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vivi3g05327 507 PANTHER OS08G0105600 PROTEIN 59 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05327 Vivi-Chr3 108970520 108972328 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05327 6 498 Cytochrome P450 AT3G26300 42.095 3.57e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05327 - - tpra:123912942 824.313