Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi3g05305 | ATGTCAAGGCCATCTATTATGATTGGCGACTTGATACCCGAACAAAACTTATGGAAAATTGTTGTTCGTGTTGTCGATGTTTGGACAGTCAAGGAACGTAATGGTCAGCAACACATCGAAGCGGTTATCCAAGATGCAAACTGGCTCAACAACCGTATTGGGAGAAAGAACTATAGACAAGTTTTCAGCCTGATGGTTGTTGTTATGCTCTTGCTGTGGCTATCAGCTGATTTGTCAAAACCAGAAAAAGTTTTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTGCGAAATTCCGTAGTTGGAACTGTGGAAAAACGAAGGATCTCTGGAGGACAAAGGAAGCGTGTAAATGTTGGATTGGAAATGATTATGGAACCTTCACTTTTGATGTTAGACGAGCCAACATCTGGCCTAGATAGTGCATCATCTCAACTTCTTCTAAGAGCATTAAGACATGAAGCTCTTGAGGGAGTGAATGTTTGCATGGTGGTTCACCAACCTACGTCTCAGGATCATTGTTCTGGAGCGGATATAATCAATGGTTCTTTCAATAATTACAAATATGCAACTGTGGAGCATTGTGTTGCACAACAACAGACAACGAATATAATTCTCTTCTATATCAGCTAG | 642 | 0.405 | MSRPSIMIGDLIPEQNLWKIVVRVVDVWTVKERNGQQHIEAVIQDANWLNNRIGRKNYRQVFSLMVVVMLLLWLSADLSKPEKVLVVERVIEFLGLQSVRNSVVGTVEKRRISGGQRKRVNVGLEMIMEPSLLMLDEPTSGLDSASSQLLLRALRHEALEGVNVCMVVHQPTSQDHCSGADIINGSFNNYKYATVEHCVAQQQTTNIILFYIS | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi3g05305 | 213 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 76 | 177 | IPR027417 | - | |
Vivi3g05305 | 213 | ProSitePatterns | ABC transporters family signature. | 112 | 126 | IPR017871 | GO:0005524|GO:0016887 | |
Vivi3g05305 | 213 | Gene3D | - | 9 | 204 | IPR027417 | - | |
Vivi3g05305 | 213 | Pfam | ABC transporter | 32 | 140 | IPR003439 | GO:0005524 | |
Vivi3g05305 | 213 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 28 | 70 | 174 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi3g05305 | Vivi-Chr3 | 108202147 | 108204051 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi3g05305 | 111 | 154 | Calmodulin-binding Proteins | AT2G36910 | 45.455 | 1.31e-06 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi3g05305 | - | - | vvo:131658766 | 397.127 |