LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi3g05265	ATGCTGAAAATTGGGTCTAATGAAGTTATAGTTCTTGGAATATGGGGCATGGGTGGCATAGGAAAGACAACCCTTGCTAAGGCTTTATATGCCAAACTGCATTCCCAATTCGAAGGTTGTTGCTTCCTCAATGTAATGGATGAGTCAAACAAGTATGGACTTGATGGCGTACACTCTAAATTTTTTTCTACATTGTTAGAGGAAGAAAATCTTCATCCTGATGCATCCTACATAGAATCCCGTTTTTCCATGAGAAGGATTGCCCGTAAAAAAGTTTTCATTGTGTTGGATGGCGTGGAAACCTTAGAGAAAATAGAAGATCTTATCCTAGAAATTGATGGGTTGGGACCAGGTAGCAGGGTAGTTGTTACAACTAGAGATAAGCACATATTTAGTCTGTTTAGTAAATGTGAAATATATGAGGTTCAGGTATTAAACAAACACGATTCTCTTCAGCTATTCAGTTTGACAGTCTTCGGACAAAAACATCCTGAAATTGGATATGAAGATCTATCAGAAAGGGTAATCGACTATTGCAAAGGCAATCCTCTGGCTTTAAAAGTTATAGGTGCAAATCTCCGTTCAAGAAGTAATGAAGCATGGGTAAATGAATTGAAAAAGCTGGAAAAGATTCCCAATAAGAAGATTTGCGATGTGTTAAAATTGAGTTTTGATGACTTAGATCGCTGTCAAAAAGCCATATTTCTAGACATCGCATGCTTTTTGAGAGAAGAGAGTAAATATTTTGTAATAGAATTATTGGAAGCTTGTGAGTTGTTTGCAATAAGTGGGATAGAAGTCCTTCTAAATAAATCTCTCATACAAATAAAACTAATTTGGCTAAGGCTTAGCAATTCGGAAGTTGATGGTTTAGAAATGCATGATTTGTTACAAAAAATGGGACGGGATATTGTTAATCAAGAATCTAAAGATCCTGGAAAACGAAGTCGATTGTGGAAAGCCGAAGAAATATGTGATGTATTGAAAAAAAACAAGGGAACAGAAGCTGTGGAAGCTATAACATTTGATAGAACAGAAGTTGGGGATCTTTACTTAAAGTCTGACTCCTTTAAAAGGATGACAAACTTAAGATATCTTGAAATCTATAATGGATCTAATGGTAGAGCATGCAATGTGTACTTTCCCGATGGTCTCGAGTGGCTTTCTGATAAATTAAGGTACTTTCGATGGGATGCTTACTGCCTTGAGTCTTTGCCAACAACCTTTTGTGCTGAAATGCTTCTAGAGCTCAACCTGACACGTAGCAAGCTTAAAAGACTATGGGATGGAGTTCAGAATCTTGTGAATTTAAAGATAATGATGCTTGAACTCTCCTACGATCTGATTGAGATCCCAGACTTATCGAGGGCTACAAATCTTGAAAGACTATATCTCTATAGTTGTGAAAGCCTGTGTCAGCTCCATCCATCCATATTATGTCTCCCCCGACTTGAACATCTAGATTTAAGAAGTTGCATAAAGATTGAAAGCCTTAAAACCAACATTCATTCAAAATCCCTCTATAATCTCTTACTCAAGGGCTGTTCATCTCTCACAGAATTTTCGGTGACATCTGAGGCAATGAGACATTTATCCTTAAATGGCACCGCTATACATGAATTGTCTTCATCGGTTTGGCGTAATACCAAGCTTACTATTCTTGACCTAACTGAATGTAACAAGCTTAACATTGTTGGGAGTAAGTTATCAAATGATCATGGACTCAGGTTTGTTGGAGATCTAGACCTTTCTGGGTGCACAGAAATCAATGCATTAAATCTTCTGTTCATCCTTGATGGCATATGGTCTTTAAATCGACTAAAAATGAACGAGTGTTGCAACTTAGAAGGTATCCCTGAGAACATCAAAAAGCATTCAAGGCTGAACTGGCTTGAATTAAATAATTGCAGGAAACTTGTGTCTCTAGCAGAGCTTCCGCCATCCCTGCTATATTTGAAAGCCATTAATTGCACTTATCTGGACACAAACTCCTCCCAACAGTCATTGCTTGAGAACATGGTACAAACATTCTCTGGCGACCCTCTCCATGTAGATGAAGGTGATAATCATTTATCTTTTTTGCCAGGAGCACAAGTACCGTGCCAGTTTGATTTTCAGACAACCGAGGCTTCAATAACTATTCCTCCCATTCCAAAATCTGACCTGCGTGGTTTCATATTTTGTGTCATTCTATCCGAGGGATTTCATGCTCTCCTTCATTCTCTTGGTTCCCTTCATTGTATCATCTTTGAACACGACAAAGAAGTCGACAGGCGTCATATTTTTCTCAATCATCTTGGGACATTAATTTCAGATCATGTATTGATATGTTGGCAGTATTACAACAGACAAGAAAGTGGAAGTTATGCATTTTGCAACCTATCATTTCGATTCGTATTTCTAGGTCAGAAGGACCAAATGTGGTGGTCAACGGAGGGAATAAAAGGGTGCGGCGTCTTACCTGTATATTCCTTAAAACATAAGTTGGAGGTGGATGGTGGTAGTAGTGTTACTAACAACATTGTTGAATTAAAATTAAAATCCACTGTTCAAGACTCGGATGACTCTGATTGGAATATGAAAAATGAGATTAAAGTCAGAAGCTCTAACAATGAAAAGGCTATTAAACATGTATATGTTAGAAGAAGAAAAAGGCCACATTATGTTAGTAGACCTCCTATCAAAGATGACTCTGATTTTAATTTACAAAATGAGATTGAAGTCAGAAGCTCTAAAAATAAAAATGAAGATGATCAAGAACAACCTTCTTGTTCTCGCAAAGAAGGAACAACCTTCTTCAATAGAAAAAAGGCCCGTACAGTGGACAGGTCGGGCAGGTCTGTTGCCGAGGTCAACAAAATAATACAAATTAGAAATGATTTGCGGCACTTGATGAGGTCAACAAGATAA	2910	0.3766	MLKIGSNEVIVLGIWGMGGIGKTTLAKALYAKLHSQFEGCCFLNVMDESNKYGLDGVHSKFFSTLLEEENLHPDASYIESRFSMRRIARKKVFIVLDGVETLEKIEDLILEIDGLGPGSRVVVTTRDKHIFSLFSKCEIYEVQVLNKHDSLQLFSLTVFGQKHPEIGYEDLSERVIDYCKGNPLALKVIGANLRSRSNEAWVNELKKLEKIPNKKICDVLKLSFDDLDRCQKAIFLDIACFLREESKYFVIELLEACELFAISGIEVLLNKSLIQIKLIWLRLSNSEVDGLEMHDLLQKMGRDIVNQESKDPGKRSRLWKAEEICDVLKKNKGTEAVEAITFDRTEVGDLYLKSDSFKRMTNLRYLEIYNGSNGRACNVYFPDGLEWLSDKLRYFRWDAYCLESLPTTFCAEMLLELNLTRSKLKRLWDGVQNLVNLKIMMLELSYDLIEIPDLSRATNLERLYLYSCESLCQLHPSILCLPRLEHLDLRSCIKIESLKTNIHSKSLYNLLLKGCSSLTEFSVTSEAMRHLSLNGTAIHELSSSVWRNTKLTILDLTECNKLNIVGSKLSNDHGLRFVGDLDLSGCTEINALNLLFILDGIWSLNRLKMNECCNLEGIPENIKKHSRLNWLELNNCRKLVSLAELPPSLLYLKAINCTYLDTNSSQQSLLENMVQTFSGDPLHVDEGDNHLSFLPGAQVPCQFDFQTTEASITIPPIPKSDLRGFIFCVILSEGFHALLHSLGSLHCIIFEHDKEVDRRHIFLNHLGTLISDHVLICWQYYNRQESGSYAFCNLSFRFVFLGQKDQMWWSTEGIKGCGVLPVYSLKHKLEVDGGSSVTNNIVELKLKSTVQDSDDSDWNMKNEIKVRSSNNEKAIKHVYVRRRKRPHYVSRPPIKDDSDFNLQNEIEVRSSKNKNEDDQEQPSCSRKEGTTFFNRKKARTVDRSGRSVAEVNKIIQIRNDLRHLMRSTR	969

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi3g05265	969	SUPERFAMILY	L domain-like	293	657	-	-
	Vivi3g05265	969	Gene3D	-	144	228	IPR042197	-
	Vivi3g05265	969	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	3	238	IPR027417	-
	Vivi3g05265	969	MobiDBLite	consensus disorder prediction	907	931	-	-
	Vivi3g05265	969	Gene3D	-	1	141	IPR027417	-
	Vivi3g05265	969	Gene3D	Ribonuclease Inhibitor	323	687	IPR032675	-
	Vivi3g05265	969	Pfam	NB-ARC domain	6	211	IPR002182	GO:0043531
	Vivi3g05265	969	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	7	563	IPR044974	GO:0006952
	Vivi3g05265	969	PRINTS	Disease resistance protein signature	546	562	-	-
	Vivi3g05265	969	PRINTS	Disease resistance protein signature	11	26	-	-
	Vivi3g05265	969	PRINTS	Disease resistance protein signature	179	193	-	-
	Vivi3g05265	969	PRINTS	Disease resistance protein signature	86	100	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi3g05265	Vivi-Chr3	107172520	107177546	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi3g05265	1	656	WRKY Transcription Factor Family	AT4G12020	33.830	8.05e-82	289

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi3g05265	-		-	vvo:131662268	1392.1