Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05234 ATGGTAAGAAACAATCCCAAACTTATAGTTACAATCATTTTATTTCTATCATTATCATTACCATTAGTCTCATGTGAAGAATGTTCATCGAAATACGAAGGTGGTTGTCACGATAAAAATGAAGCATTAAAGTTAAAGGTAATTGCAATATTTTGCCTATTATTATCAAGCATGGTTGGTATTTGTATTCCAATTTTCACAACTTCGATTCCGGCTTTAAACCCCGACGGAGACTTGTTCGTCATTATAAAAGCTTTCGCCTCCGGTGTTATACTCGCTACCGGTTATATGCATGTGATGCCTGATTCATTTGCAGATTTAACTTCTCCTTGTTTGCCTCAACACCCTTGGCATAAATTCCCATTCACCACTTTCATTGCTATGATATCCGCTGTTTTTACTCTCATGGTTGATTCATTTTCGATAAGTTACTTCAAGAAGAAACTTCCCATGTCTTCTTCTTTGAATGATTCCAAAACGACAAAGGAATTGGAACTTGGTCATGGTCATGGTCATGATCATGGTCATGATCTTGCAGTTGCAAATGGACATGACAAGAATGTGAATGCCGAACAATTGCTTCGTTACCGTGTTGTGGCTCAGGTTTTGGAGTTAGGAATTGTGGTGCACTCAGTAGTGATTGGTTTGTCAATGGGTGCTTCGGAGAACCCTTGCACAATAAAGCCTCTCATTGCTGCACTTTGCTTCCATCAAATCTTTGAGGGAATGGGTTTGGGTGGTTGCATTCTTCAGGCTGATTATGGAGTGGGGATGAAAGGGATAATGGTATTTTTTTTCTCGGTGACGACACCATTTGGGATAATATTAGGGATTGGTTTATCGAAGGTGTATAGTGACACTAGTCCAACTGCACTAATTGTAGAAGGGATTCTAAATGCTATATCTGCAGGGCTTCTCAATTATATGGCACTTGTTGAATTATTGGCTAATGATTTTATGGGTGCAAAGTTACAAAGTAGAATCAAGCTTCAATTATGGTCTTATGTAGCTGTTTTGTTGGGCGCAGGAGGCATGTCTATCATGGCAATTTGGGCATAA 1059 0.39 MVRNNPKLIVTIILFLSLSLPLVSCEECSSKYEGGCHDKNEALKLKVIAIFCLLLSSMVGICIPIFTTSIPALNPDGDLFVIIKAFASGVILATGYMHVMPDSFADLTSPCLPQHPWHKFPFTTFIAMISAVFTLMVDSFSISYFKKKLPMSSSLNDSKTTKELELGHGHGHDHGHDLAVANGHDKNVNAEQLLRYRVVAQVLELGIVVHSVVIGLSMGASENPCTIKPLIAALCFHQIFEGMGLGGCILQADYGVGMKGIMVFFFSVTTPFGIILGIGLSKVYSDTSPTALIVEGILNAISAGLLNYMALVELLANDFMGAKLQSRIKLQLWSYVAVLLGAGGMSIMAIWA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05234 352 Pfam ZIP Zinc transporter 44 349 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vivi3g05234 352 PANTHER ZINC/IRON TRANSPORTER 42 349 - -
Vivi3g05234 352 NCBIfam ZIP zinc/iron transport family 28 352 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05234 Vivi-Chr3 105729673 105730977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05234 1 352 Inorganic Solute Cotransporters AT1G31260 56.164 3.18e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05234 K14709 - gmx:100784872 473.396