LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi3g05233	ATGAGATCATCAATTCAATATCTGCAGCAGGATTCCAGTTCATCTGTTCCGATTTCTGTGAATCCAAACATGAATTTTCATGTTCGATTCTTTAGAAGCCACGAGTATCCGCGACATCAGCAACAGCAGCAACAGTATGGTTCTCTTCTTGCATTTCCTGTGTTCGAAAGAGGAAGTGGAACATATCTAGGTGTCATTGAGTTTGTTATCGCCAATCAAAACCTCATCAATTATCGTCCACAACTCGATCATCTCTCCAATGCTCTCGAGGCTGTTGATTTTAGAAGTAGCCACAACATGAATATTCCACCAGCAGTAAAGATTTTTGAGGAGTTGTACGAAGCAGCGGTGAATGAGATCGTAGAGGTGTTGGCGTCTGTATGCAAGACTCGCAATTTGCCACTAGCGCTAACATGGGCTCCTTGCATACAACAACAAGGAGGAAAAGGTACTACCGGTGGTGGTGGATGCAGTGTTTCGATTACAGTTCCAACGGATCAGATGAACAATAATAATCGTATGATGATGAGTTGCATATCGACTGTTGATTCAGCTTGTTATGTTGGTGACATGGAGATGTTAAGATTTCAAGATCAAATGCAAATGGTTGAAGAGGATAAAGACATAGAAATGTTGCCAAAACAAAAATAA	651	0.4101	MRSSIQYLQQDSSSSVPISVNPNMNFHVRFFRSHEYPRHQQQQQQYGSLLAFPVFERGSGTYLGVIEFVIANQNLINYRPQLDHLSNALEAVDFRSSHNMNIPPAVKIFEELYEAAVNEIVEVLASVCKTRNLPLALTWAPCIQQQGGKGTTGGGGCSVSITVPTDQMNNNNRMMMSCISTVDSACYVGDMEMLRFQDQMQMVEEDKDIEMLPKQK	216

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi3g05233	216	PANTHER	PROTEIN NLP8	17	200	IPR045012	GO:0003700

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi3g05233	Vivi-Chr3	105721906	105722737	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi3g05233	22	196	NLP Transcription Factor Family	AT4G35270	43.017	1.27e-37	137

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi3g05233	-		-	vvo:131658732	412.535