Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05205 ATGGCGGCAATGCTCAATTTCACCGGCCTCTCCGCCGGACCACTCCAATTCTCCGATGACTGTTCCTCCTCCGTCCAGAAACCGAGCTCCAATAGCTCAAATCGCCGCACGGTTTCCGTCCGAGCCTCATCGGCAGTAGTCGACACACGGAGGCCGGCGACTAGTCTCTACGAAGTTCTTCGAATCAAGCCGGGAGCATCTCATTCGGAGATCAAGTCGGCTTACCGGAGTCTGGCGAAGGTTTACCATCCCGACGCGGCGGCGCAACGGTTTCTGGAGTGTGGCGACAGAGACTTCATCGAGATCCGCAAAGCTTACGAGACACTTTCTGATCCATCAGCGAGAGCGATGTACGACATGTCGTTGATGGCGGCACAGTGCGAGAGGAATAGGCAGTTTTCGGTTTCGGTGACACCGAAACGGTATTCTTCAGGATATACAAGATGGGAAACGGATCAATGCTGGTAG 468 0.5491 MAAMLNFTGLSAGPLQFSDDCSSSVQKPSSNSSNRRTVSVRASSAVVDTRRPATSLYEVLRIKPGASHSEIKSAYRSLAKVYHPDAAAQRFLECGDRDFIEIRKAYETLSDPSARAMYDMSLMAAQCERNRQFSVSVTPKRYSSGYTRWETDQCW 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05205 155 PRINTS DnaJ domain signature 75 90 IPR001623 -
Vivi3g05205 155 PRINTS DnaJ domain signature 94 114 IPR001623 -
Vivi3g05205 155 PRINTS DnaJ domain signature 57 75 IPR001623 -
Vivi3g05205 155 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 20 155 - -
Vivi3g05205 155 ProSitePatterns Nt-dnaJ domain signature. 99 118 IPR018253 -
Vivi3g05205 155 Gene3D DnaJ domain 40 142 IPR036869 -
Vivi3g05205 155 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
Vivi3g05205 155 Pfam DnaJ domain 56 119 IPR001623 -
Vivi3g05205 155 SUPERFAMILY Chaperone J-domain 52 125 IPR036869 -
Vivi3g05205 155 CDD DnaJ 57 111 IPR001623 -
Vivi3g05205 155 SMART dnaj_3 54 114 IPR001623 -
Vivi3g05205 155 MobiDBLite consensus disorder prediction 21 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05205 Vivi-Chr3 104655387 104656157 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05205 57 119 C2H2 Transcription Factor Family AT1G74250 47.761 2.73e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05205 - - psat:127084677 218.009