Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05169 ATGGCGGCAATGCTCAATTTCACCGGCCTCTCCACCGGACCACTCCAATTCTCCGATGACTGTTCCTCCTCCGTCCGGAAACCGAGCTCCAATAGCTCAAATCGCCGCACGGTTTCCGTCCGAGCCTCATCTGCAGTTGTCGACACACGGAGACCGGCGACAAGTCTCTACGAAGTTCTTCAAATCAAGCCGGGAGCATCTCATTCGGAGATCAAATCGGCTTACCGCAGTCTGGCGAAGGTTTACCATCCCGACGCGGCGGCGCAACGGTTTCCGGAGTGTGGCGACAGAGACTTCATCGAGATCCGCAAAGCTTACGAGACGCTTTCTGATCCATCAGCGAGAGCGATGTACGACATGTCGTTGATGGCGGCACAGTGCGAGAGGAATAGGCAGTTTTCGGCTTCGATGACACCGAAACGGTATTCTTCGGGATATACAAGATGGGAAACGGATCAATGCTGGTAG 468 0.547 MAAMLNFTGLSTGPLQFSDDCSSSVRKPSSNSSNRRTVSVRASSAVVDTRRPATSLYEVLQIKPGASHSEIKSAYRSLAKVYHPDAAAQRFPECGDRDFIEIRKAYETLSDPSARAMYDMSLMAAQCERNRQFSASMTPKRYSSGYTRWETDQCW 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05169 155 PRINTS DnaJ domain signature 75 90 IPR001623 -
Vivi3g05169 155 PRINTS DnaJ domain signature 94 114 IPR001623 -
Vivi3g05169 155 PRINTS DnaJ domain signature 57 75 IPR001623 -
Vivi3g05169 155 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
Vivi3g05169 155 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 21 155 - -
Vivi3g05169 155 ProSitePatterns Nt-dnaJ domain signature. 99 118 IPR018253 -
Vivi3g05169 155 SMART dnaj_3 54 114 IPR001623 -
Vivi3g05169 155 MobiDBLite consensus disorder prediction 18 43 - -
Vivi3g05169 155 SUPERFAMILY Chaperone J-domain 52 125 IPR036869 -
Vivi3g05169 155 Gene3D DnaJ domain 41 144 IPR036869 -
Vivi3g05169 155 Pfam DnaJ domain 56 119 IPR001623 -
Vivi3g05169 155 CDD DnaJ 57 111 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05169 Vivi-Chr3 103141360 103142348 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05169 57 119 C2H2 Transcription Factor Family AT1G74250 46.970 1.71e-07 47.8