Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04935 ATGGCGAGCTTCTGGACTGATTTGGCGAAGTCATATGTGGAGAAATTGATAAATGGCGTAATTGCAGAATCGAGTTATATCTGTTGCTTCACATGCATTGCTAAGGATTTTGAAGAAGAAAAAGCTAGGTTGGAAATAGAAAGAACAACTTTCAAGCAACGCATTGAAGTGGCAACCCGGAGAGGGGAAGATGTTCAAGGTAATGCTCTTTCTTGGGTAGAAGAAGTTGATAGGCTCATTCAAGAAGACACCAAAACAAAACAAAAATGTTGTTTTGAATTTTGTCCTCATTGCATATGGAGATATAGAAGAGGAAAAGTACTGGCAAATAAGAAGGAGCATATTAAAGAATTAATGGAAACTGGAAAGGAGCTTACAATCGGACTCCCTGCTCCTCTTCCAGACGTTGAACGCTATTCATCCCAACACTACATGCATTTTAAAAGCAGAGAATCCAAATACATAGAGCTTTTGGATGAACTCAAAGATGACAACAATTATATAATTGGGTTGCAAGGGATGGGCGGCACAGGAAAAACTACATTGATTAAGGAAGTGGGTAAGAAACTTAAGCAATCAAAACAATTTACGCATATCATCGATACCACAGTGTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGGCCCTTGGGATTGAAATTTGATGATTGTAATGAATCAGATAGGCCCAAAAAGCTATGGAGTAGATTAACCAATGGTGAGAAGATTCTTCTAATATTGGACGATGTGTGGGGCGATATAGATTTTAATGAAATTGGAATTCCATATAGTGATAATCACAAAGGTTGTAGGATTATTGTAACCACGCGGAGTCTGTTGGTGTGCAAAAAACTAGGATGCATTAAGACAATCCAACTAGATCTCTTATCTGAAGAAGACGCATGGATCATGTTCAAAAGGTATGCAGGTCTAAGTGAAACTTCAACTCAAGTTTTTCTTGACAAGGGCCTTAAAATTGCAAATGAATGCAAAAGGTTACCTATTGCAATTTCTGTTATGGCTAGTAGTTTGAAAGGCGAACAACGCCGGGATGAGTGGGATGTGGCCTTAAAATCCTTGCAAAAACCTATGTCCATGCATGGTGTTGATGATGAACTTGCTAAAATTTATAAATGCTTGCAATTTAGCTATGACAATATGAAGAATGAAAAGGCAAAGAGTTTATTCCTTTTGTGTTCCGTATTTCGAGAAGATGAAGATCTTCTTATTGAAAGGTTAGTCAGATTTGCCATCGGAGGAGGTCTTTTTGGGGAAGATTATGGCATCTACGAAGATGCTAGAAGTCAGGTAGTTATATCCAAAAATAAACTCTTAGATTCTTGTTTATTGTTGGAAGCCGGTCAATGGACAGTAAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGATAAGGAACAAAGAGATCCAAACAATACGAGTGTATGACAAAAATCAAAAGGCAATGGTTGAAATGGAGAAAAATATTAAATATTTGTCATGTGAAGGCAACCCAAAGGATGTGTTTTCCTGTAAGTTTGATGGTTCCAAGCTTGAGATTCTAATTGGCATCATGTCCAAGGATGAAGACGCCCAGGATACAAAAATCGAGGTACCCGACTCATTTTTTGAAAATAATACCAGTCTTCGAGTTTTTCATTTACTTGGTGATAGAACTAGTAGTCTAATAGCTCTATCATTACCTCAATCAATACAATCGCTGAAGAATATTCGATCTCTTATCTTTACACGTGGTGATTTGCGTGACATTTCTATATTGGGAAATCTGCAAAGTCTTGAGACACTTGATTTGGATCAATGTATAATTTTAGAATTGCCTAGTGGAATCACAAAACTCGAGAAATTTAGATTGTTGAAATTGGAATGGTGTGTAATTGGAAGGAATAATCCATTTGAAGTGATTGAAAAGTGCTCATCACTTCAAGAGTTGTATTTTGTAGGGAGTTTTAATTGGTGTTGTCAAGAAATAACCTTCCCTAAATTGCAAAGGTTTTTTGTAACTGACTACCATCCATTTAAGTATGTATCATCAAAGCATGTGTCTTTTGTAAGCAGAGATGAGCTTTTCCTATCTAAAACAACACTTAAGTACTGTATGCAAGAAGCAGAGGTTGTTATACTAATAAGAATCGAGGGGGGATGGAGAAATATCATGCCAGCGATTGTTCCTTTGGATCATGGTATGAATAATATAGTTGAGCTTCGTTTAAGGTCGATTTCACAACTACAGTGCCTCATTGACACTAAGCATACTTATTCTCAAGTATCACATGTCTTCTCCAAGTTGGTTGAACTGTATCTGGATGAAATGGAAAATTTGGAAGAATTGTGCAATGGTCCTCTTTCCTTTGACTCTCTTAAGAGTTTAGAGGACCTATCTATTGAGAATTGCAAACACTTTCAAAGCTTATTTAAGTGCAACCTTAACCTTTGCAATCTAAAGAATGTGTTACTGGTGAGTTGCCCGATGTTGATCTCCTTATTTGAACTATCAATTGCTTGTAGCCTAGTGTTGTTGGAGATATTGAAAATAATTGACTGTGGACATCTTGAATACATATTAAGAGATGAAAGAAAAGGAGAATGGTCGAGAGGAGAAATAATTGACAATGATAGAACAAGTCGCGACCCATTGTTTTTGAAATTGAAAGTTCTTGTAATTGAGAAGTGTCCAAAATTTGAAGTAATACTCCCATTTGTCTCTGCTCATGATCTTCCGGCACTAGAATCCATAACAATGAAAAGTTGTGATAAGCTGAAATACATATTTGGACAAGATGTCAAACTTGGTTCTCTCAAAAATATAGAGCTTAATGATGTACCCAATTTGATTGACATTTTCCCAGAATGTAATCATACAATGTCTTTATCCATTAAGAGGTCATCTTCTATTTCTAGATCTGCATCCAAGCCATCAACACAGGCAGACCCTATCAAACGCAACATCTTTTCATGGACTTATATGTATTGTTGTGGTAAAAAATATGAGAACAAATTGAAGAGTACCACAAGTACTAAAATCCCATTGGTTTATGAGAATCAACCGCAGAGCAGCTTACTGGAAACAAATTCATATTGCCTTAACATAAACATATGGGAGCGTGCTCACTGTCTTTCAAGACAATCAATGGTGTTGTGCAATGTTAAAGAGATTGAGTTGACTCAGTTGAGGAAGATAAAATCAGTATTTATCCTTTCTATTGCTCCAAGAATGTTGTTGGAAACTTTGATAATTGATGATTGTGATGAATTGAGGCACATAGTAATAGATACTTGTGATCATGATAGTACTACTGGTGGAAATAATTTGGGCAATGTCTTCCCAAAGTTGAAAGAGCTTTACATTGAGAATTGCAACCAATTGGAATACATATTTGGACATTACACTGGTGATCATCAAAACCACCCTGAAACTCATCTTCATCTTTTGGCATTGGAACGTCTTCAACTCATCAATCTGTCAAGTTTAGTTGCCGTGTGTCCCGAACAATACCACACAACATTTCAAAAATTGAAATATCTTGAACTCAATAATTGTCCACAAGTAACTAATGTCAAATCTATTAGTGATTTCTTAACTCACCCTTCAGTAACAAGATCTACAAACAATACAATCATCCAGGAGTTGAGTGGGAACATGGAGTCTTTGCTTGCTTTGGAAAGACTAGTGTTAATTAAGTCCAAAGTAGAAAGTATATTTTGTGTCACTGAAGTAAATGAACAGCAAATAAATACAGTGTTGCAAAAGATTAAGCTGGAAGATTTATATGTGATGACATGTCTTTCTGTGGGTCCCAAAAATTCTTTTGCCCTCCTGAATTTAAAATCAATAGAAATAGTGCGATGTAAAAAGCTGCAAGTCATTTTCTCTGATTCTATTTTAAGATGTCTACCACAGTTGGTTGGTATGATAATAATAGAATGTGATGAGTTAAAGCATATAATTGAAGATGATTTGGAGAATGAAAAAATGTCAAATTCTTCATCCTTAAGGACATGCTTCCCAAAGCTAGAAGTGCTCGTTGTAGAAAAATGCAACAAATTGAAAAGTATGTTTCCGGTCTCCATATGTAATGAGCTTCCTGAGCTTAAGTGTCTCATCATAAGAGAAGCAGATGAATTACAGGAAATATTTAAAAGTGAAACGGGGGAAATTCAAAATGTCAAGATTCCAAATTTGAAGTTTGTAGCAATTGTGAACCTACCAAGCCTCTTCCAAACAGAGGGAATTCAATTCGAAACTGTAGAATATCGTTGTGTATTGGATTGTCAAAAACTCTCTTTCACTTTGGCATCATCGATGCCCGAATACCTTGAGGATACTTTTGATTGCAATGCATTCATACTGTTTGATTTCGAAACAGTTGTAAGTCTGACTCGTCTATTTCGAGAATTAAAAGAAAAGTCCAAACCTCGCGATATTGGTACTAAAATGTATGCAGCTGCAAATGAAGTGGAAGCAACATCAGAACATGAGTTGACTTCTTCACAGGGTATCGAGATATGTGTTGAAGAAGGAACTAGTTCAACTAATGCCAAGACAAAATCATCATCAACACATTTAGAATTAGAAGATGGTGATAGCCAAATAGCCTTGAATTCTATTTCCATTGCAACGACTGATAGCAATGATCAAGTTTCTTTAAATGATGATGTTGCCGTGAAAGTAAACTCAATTGTTGAGCAACAATTTCCTGAGGAAGATGACATAATAGTTTCAAAAGCCAAACCCTCTTCTATTGCATCTCAGTTTCCCTCTATGCCTTCTAAAGGCGACCCTTCTCAAAAAGTAGAGGAGTTAAGTTCTTCTTTGCTTGTGACAAGCGAGCTTGAGCAACTAGTCTCCAAGAAGTATCTGGATTATGAGAACTTGTTTTTATTGACTGATTTCCTTGTAAAGCATCCTTCTGTTCTTTTAAGGGACACTTCACTTAGTAAGAGATACAAGGGTTATGCCTACAACTGCCTAGCCGAGCTATTGAAATTCCTCCAAACCCATAGTGTTTTGGATGTGTTAGGTTCAAGCCACTCTGAATTTATTGAGTTATTACAAGATGTTCGCAAATGTGGTTTTGCTAAGGAATGGTTGGATGTTGTCGAAAAGCGTGTTTTGTTTCCTGGTTTACAAGTTTCTCAAGATGCATTGCAAAAACTGTGGGACTCAAATCACATATTGACTCAACAAGTAGAGGATCTTAAGCATCAATTGACTTCCTCTAAAGCTGTTTTAGAGAGCATCATTCAACAGAACCCACAAATTTTAGAAACCCAGTCTGCTTTAAGTGATCCTATTGGCTATTAG 5334 0.3639 MASFWTDLAKSYVEKLINGVIAESSYICCFTCIAKDFEEEKARLEIERTTFKQRIEVATRRGEDVQGNALSWVEEVDRLIQEDTKTKQKCCFEFCPHCIWRYRRGKVLANKKEHIKELMETGKELTIGLPAPLPDVERYSSQHYMHFKSRESKYIELLDELKDDNNYIIGLQGMGGTGKTTLIKEVGKKLKQSKQFTHIIDTTVSFSPDIKKIQDDIAGPLGLKFDDCNESDRPKKLWSRLTNGEKILLILDDVWGDIDFNEIGIPYSDNHKGCRIIVTTRSLLVCKKLGCIKTIQLDLLSEEDAWIMFKRYAGLSETSTQVFLDKGLKIANECKRLPIAISVMASSLKGEQRRDEWDVALKSLQKPMSMHGVDDELAKIYKCLQFSYDNMKNEKAKSLFLLCSVFREDEDLLIERLVRFAIGGGLFGEDYGIYEDARSQVVISKNKLLDSCLLLEAGQWTVKMHDLVRDAAQWIRNKEIQTIRVYDKNQKAMVEMEKNIKYLSCEGNPKDVFSCKFDGSKLEILIGIMSKDEDAQDTKIEVPDSFFENNTSLRVFHLLGDRTSSLIALSLPQSIQSLKNIRSLIFTRGDLRDISILGNLQSLETLDLDQCIILELPSGITKLEKFRLLKLEWCVIGRNNPFEVIEKCSSLQELYFVGSFNWCCQEITFPKLQRFFVTDYHPFKYVSSKHVSFVSRDELFLSKTTLKYCMQEAEVVILIRIEGGWRNIMPAIVPLDHGMNNIVELRLRSISQLQCLIDTKHTYSQVSHVFSKLVELYLDEMENLEELCNGPLSFDSLKSLEDLSIENCKHFQSLFKCNLNLCNLKNVLLVSCPMLISLFELSIACSLVLLEILKIIDCGHLEYILRDERKGEWSRGEIIDNDRTSRDPLFLKLKVLVIEKCPKFEVILPFVSAHDLPALESITMKSCDKLKYIFGQDVKLGSLKNIELNDVPNLIDIFPECNHTMSLSIKRSSSISRSASKPSTQADPIKRNIFSWTYMYCCGKKYENKLKSTTSTKIPLVYENQPQSSLLETNSYCLNINIWERAHCLSRQSMVLCNVKEIELTQLRKIKSVFILSIAPRMLLETLIIDDCDELRHIVIDTCDHDSTTGGNNLGNVFPKLKELYIENCNQLEYIFGHYTGDHQNHPETHLHLLALERLQLINLSSLVAVCPEQYHTTFQKLKYLELNNCPQVTNVKSISDFLTHPSVTRSTNNTIIQELSGNMESLLALERLVLIKSKVESIFCVTEVNEQQINTVLQKIKLEDLYVMTCLSVGPKNSFALLNLKSIEIVRCKKLQVIFSDSILRCLPQLVGMIIIECDELKHIIEDDLENEKMSNSSSLRTCFPKLEVLVVEKCNKLKSMFPVSICNELPELKCLIIREADELQEIFKSETGEIQNVKIPNLKFVAIVNLPSLFQTEGIQFETVEYRCVLDCQKLSFTLASSMPEYLEDTFDCNAFILFDFETVVSLTRLFRELKEKSKPRDIGTKMYAAANEVEATSEHELTSSQGIEICVEEGTSSTNAKTKSSSTHLELEDGDSQIALNSISIATTDSNDQVSLNDDVAVKVNSIVEQQFPEEDDIIVSKAKPSSIASQFPSMPSKGDPSQKVEELSSSLLVTSELEQLVSKKYLDYENLFLLTDFLVKHPSVLLRDTSLSKRYKGYAYNCLAELLKFLQTHSVLDVLGSSHSEFIELLQDVRKCGFAKEWLDVVEKRVLFPGLQVSQDALQKLWDSNHILTQQVEDLKHQLTSSKAVLESIIQQNPQILETQSALSDPIGY 1777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04935 1777 Gene3D Ribonuclease Inhibitor 1178 1415 IPR032675 -
Vivi3g04935 1777 Gene3D Ribonuclease Inhibitor 727 1140 IPR032675 -
Vivi3g04935 1777 FunFam Probable disease resistance protein At1g61300 132 293 - -
Vivi3g04935 1777 SUPERFAMILY L domain-like 1052 1415 - -
Vivi3g04935 1777 Gene3D - 299 392 IPR042197 -
Vivi3g04935 1777 Pfam NB-ARC domain 154 390 IPR002182 GO:0043531
Vivi3g04935 1777 Coils Coil 34 61 - -
Vivi3g04935 1777 SUPERFAMILY L domain-like 463 967 - -
Vivi3g04935 1777 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 403 IPR027417 -
Vivi3g04935 1777 Gene3D Ribonuclease Inhibitor 456 678 IPR032675 -
Vivi3g04935 1777 PRINTS Disease resistance protein signature 168 183 - -
Vivi3g04935 1777 PRINTS Disease resistance protein signature 241 255 - -
Vivi3g04935 1777 PRINTS Disease resistance protein signature 334 348 - -
Vivi3g04935 1777 PRINTS Disease resistance protein signature 598 614 - -
Vivi3g04935 1777 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 917 1135 - -
Vivi3g04935 1777 Gene3D - 135 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04935 Vivi-Chr3 94491162 94500180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04935 169 635 WRKY Transcription Factor Family AT5G45050 23.225 3.88e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04935 - - psat:127080586 2397.85