Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04906 ATGGTTAAGGATATTCCTTTCATTGGTTTATGTATACTAACTTTGAGTTTAGCTTTTCTCCTGAAAAAACTTCTCTCAAAAAGTCAAACAAAAAATGTTCCAAAAGGGTCTCTTGGATATCCAATTATTGGAGAGACACTTGGTTTTCTTAGAGCACAGAGACAAGACAAAGGCTATGAGTGGTTACAAGAAAGGGTATCAAAGTATGGTTCTGTCTTTAAAACCTCCTTAATGGGTTCTCCAACAGTGGTTATTATTGGACAACAAGGAAACAAGTTTGTTCTTGGTTCCTCAGATGATGTTATTTCTGCTAAGAAACCTATAACTCTTCAAAAGATACTTGGAAAGCAAAGCTTATCAGAACTTGTAGGATCAAGGCACAGGTTGGTCAAAGGAGAACTGCTGAAATTCTTGAAACCTGAATGCCTTCAAAACTATGTCAAAAAGATGGATGAGTTAGTGCACACAACACTACTAAAAGAATTGAAAGAGAATAAAACAATACAGGTTGTGAGGTTGATGAAAAAACTGGCCTATGATATGACATCCAGCATCTTATTTGACATAGATCAACACACAAGAGAGATTCTATTTGATGATTTTACCACATCATTTAAAGCAATTCACTCTCTTCCAATAAATCTCCCTGGCACATCATTTTGGAGAGGCCAAAAAGCTAGAGCAAGAATTGTGGAAACGATACTTCCTATTATGAACGAAAGACGGCAAGAATTATCAAAAGGGGTTCTAAGTTCTACAAATGATATGCTTTCATGCCTTCTCGCGATAAGAGATGAAAATGACAAGCCTCTAGACGATGACATAATTACCGACAATTTTGTTTTTATGTTTGTTGCAAGTCATGACACATCTGCTACTCTCATGACATTGATGATATGGAAGTTATCTAGAGATCAAGAGGTTTATAACAAAGTTTTAGAAGAACAAATGAGGATTTTAAAGCAAAGGAAAGGAAATGAAGAGAGGTTAACATGGGGAGAGATACAAAAGATGAAATACACATGGAGAGTTGCTCAAGAATTGATGAGGATGATCCCTCCTTTGTTTGGTGGATTTAGGAAAGCACTTAAGGATACTAGTTATCAAGGATATGACATACCAAAAGGGTGGCAGGTATATTGGGCATCATGTGGAACACATATGGACAAAGATATATTCGAGAATCCAGACAAGTTTGATCCATCTCGTTTTGAAAATCAAACAAAGTCAATCCCACCCTTTTCTTACCTTCCATTTGGTGCAGGGTCTCATAATTGCATAGGAAATGAGTTTGCTAGGGTTCAGACATTAACTACCATTCATAATTTTGTGAAGTTGTACGAATGGTCTCAATTGAATCCAAAGGAAACTCTTACTCGTCAACCAATGCCTTATCCATCATTGGGCCTTCCAATTAAGATCAAACCAAGATGTAATATGTCTTAA 1446 0.3638 MVKDIPFIGLCILTLSLAFLLKKLLSKSQTKNVPKGSLGYPIIGETLGFLRAQRQDKGYEWLQERVSKYGSVFKTSLMGSPTVVIIGQQGNKFVLGSSDDVISAKKPITLQKILGKQSLSELVGSRHRLVKGELLKFLKPECLQNYVKKMDELVHTTLLKELKENKTIQVVRLMKKLAYDMTSSILFDIDQHTREILFDDFTTSFKAIHSLPINLPGTSFWRGQKARARIVETILPIMNERRQELSKGVLSSTNDMLSCLLAIRDENDKPLDDDIITDNFVFMFVASHDTSATLMTLMIWKLSRDQEVYNKVLEEQMRILKQRKGNEERLTWGEIQKMKYTWRVAQELMRMIPPLFGGFRKALKDTSYQGYDIPKGWQVYWASCGTHMDKDIFENPDKFDPSRFENQTKSIPPFSYLPFGAGSHNCIGNEFARVQTLTTIHNFVKLYEWSQLNPKETLTRQPMPYPSLGLPIKIKPRCNMS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04906 481 Coils Coil 310 330 - -
Vivi3g04906 481 Gene3D Cytochrome P450 23 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 Pfam Cytochrome P450 34 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Vivi3g04906 481 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 PRINTS E-class P450 group IV signature 338 354 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 PRINTS E-class P450 group IV signature 426 444 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 PRINTS E-class P450 group IV signature 410 426 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 FunFam Taxadiene 5-alpha hydroxylase 24 477 - -
Vivi3g04906 481 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 SUPERFAMILY Cytochrome P450 31 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04906 481 CDD CYP90-like 65 476 - -
Vivi3g04906 481 PANTHER CYTOCHROME P450 26 31 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04906 Vivi-Chr3 93732118 93735170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04906 4 481 Cytochrome P450 AT4G19230 33.333 5.13e-77 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04906 - - gmx:100790209 766.148