Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04902 ATGTCAACACATCTGCAAGATCCACCTTCAAACTCAAACTACAATCCCAATGCCACATCATCAACACCCCCTCCCAACCCCTTCATCCGCGGCAGCATCAACGGTGTCGCCACCGCTCAACACGGCGGCGAATCCCACTCTCACCACCGGAGAGCGCACTCCGAGATCAACTATCGTCTCCCCGACGAAATGATGGAACTATCACCGTCAAATCCATTGAACGGAGGAGGCTCCTCGACCGCCAGCCTGGAGGAGATCGGATCGGAAGACGATCTGTTCTTCACCTACATTGACGTGGAGAAGCTCGGAAATGGATCGGATCAAAGCGGTTACGGTAACGGAGCGGGGACGAGCGGTCAAAATGATGGAGAGAAGAGTTTGAATGAAGCTACTACGCCGAGGACGAGGCATAGACATAGCTGCTCTGTTGATGGTACGACGTCGACGACGAGTATGCTTGGAGAGATCATGGATGCGAAGAAAGCTATGCCTCCGGATAAACTCGCGGAGCTTTGGACTCAGGATCCAAAGCGTGCCAAGAGAATACTTGCGAATAGACAATCTGCTGCGCGTTCAAAAGAGAGAAAGGCCCGTTATATACAAGAGCTTGAGCGCAAAGTTCAGACCCTTCAAACAGAGGCCACAACTCTCTCTGCTCAATTGACATTATATCAGAGGGACACAAGTGGTCTGAGTACTGAAAATACCGACCTTAAGCTCCGTCTGCAAGCCATGGAACAACAGGCAAACCTTCGAGATGCTCTTAATGATGCGTTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGAGAGGCAATGAACCCCTCTGAATCATATAATCTTGGAATGCACCCGATGCAATTCGCAGGGTCAAATTTCTTTTCAATGCCGCAACAACATTCAGGTCCTTCTAGTCACCAGAACATACAATTTCCTCAATTCGGTCACTCTCCATCTAACATGCCAACTCATCAGCTGCAACAGACCAATTCTCACCAAATGTCAGAAATGTTGCAAAACGATCACCTCGGTCGTTTTAAGGGACTTGACATCAGTAGTAAAGGATCAGCCCTCGTGAAATCTGAAGGTCCCTCAATATCTGCAAGTGAGAGTAGCACTACATTTTGA 1131 0.4872 MSTHLQDPPSNSNYNPNATSSTPPPNPFIRGSINGVATAQHGGESHSHHRRAHSEINYRLPDEMMELSPSNPLNGGGSSTASLEEIGSEDDLFFTYIDVEKLGNGSDQSGYGNGAGTSGQNDGEKSLNEATTPRTRHRHSCSVDGTTSTTSMLGEIMDAKKAMPPDKLAELWTQDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTSGLSTENTDLKLRLQAMEQQANLRDALNDALMKEVERLKIATGEAMNPSESYNLGMHPMQFAGSNFFSMPQQHSGPSSHQNIQFPQFGHSPSNMPTHQLQQTNSHQMSEMLQNDHLGRFKGLDISSKGSALVKSEGPSISASESSTTF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04902 376 Coils Coil 193 220 - -
Vivi3g04902 376 CDD bZIP_plant_RF2 178 227 IPR044759 GO:0003700|GO:0006355
Vivi3g04902 376 MobiDBLite consensus disorder prediction 104 149 - -
Vivi3g04902 376 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 238 IPR004827 GO:0003700|GO:0006355
Vivi3g04902 376 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 361 - -
Vivi3g04902 376 MobiDBLite consensus disorder prediction 106 128 - -
Vivi3g04902 376 MobiDBLite consensus disorder prediction 298 333 - -
Vivi3g04902 376 FunFam probable transcription factor PosF21 176 229 - -
Vivi3g04902 376 Gene3D - 177 227 - -
Vivi3g04902 376 SMART brlzneu 173 237 IPR004827 GO:0003700|GO:0006355
Vivi3g04902 376 MobiDBLite consensus disorder prediction 1 33 - -
Vivi3g04902 376 SUPERFAMILY Leucine zipper domain 177 228 IPR046347 GO:0003700|GO:0006355
Vivi3g04902 376 MobiDBLite consensus disorder prediction 1 28 - -
Vivi3g04902 376 Pfam bZIP transcription factor 177 235 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04902 Vivi-Chr3 93617485 93621576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04902 5 376 bZIP Transcription Factor Family AT2G40620 49.136 5.86e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g04902 bZIP_1 4.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04902 - - gmx:100775607 506.523