Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04856 ATGGTTAAAGATATTCCTTTCATTGCTTTATGCATACTAACTTTGAGTTTAGCTTTTCTCCTGAAAAAACTTCTCTCAAAAAGTCAAACAAAAAATGTTCCAAAAGGGTCACTTGGATATCCTATTATTGGAGAGACACTTGGTTTTCTAAGAGCACAGAGACAAGACAAAGGCTATGAGTGGTTACAAGAAAGGGTATCTAAGTATGGTTCTGTCTTTAAAACCTCCTTAATGGGTTCTCCAACAGTGATTATTATTGGACAACAAGGAAACAAGTTTATTCTTGGTTCCTCAGATGATGTTATTTCTGCTAAGAAACCTATAACTCTTCAAAAGATACTTGGAAAGCAAAGCTTATCAGAACTTGTAGGATCAAGCAGGCACAGGTTGGTCAAAGGTGAACTGCTGAAATTCTTGAAACCTGAATGCCTTCAGAACTATGTCAAAAAGATGGATGAGTTAGTGCACACAACACTTCTAAAAGAATTGAAAGGGAATAAAACAATACAAGTTGTGAGGTTGATGAAAAAACTGGCCTATGATATGACATCCAGCATCTTATTTGACATAGATCAACACACAAGGGAGATTCTATTTGATGACTTTACCACATCATTTAAAGCAATTCACTCTCTTCCAATAAATCTCCCTGGCTCATCATTTTGGAGAGGCCAAAAAGCTAGAGCAAGAATTGTGGAAATGATACTTCCTATTATGAACGAAAGACGGCAAGAATTATCAAAAGGGGTTCTAAGTTCTACAAATGATATGCTTTCATGCCTTCTCGCAATAAGAGATGAAAATGATAAGCCTTTAAACGACGACTTAATTACCGACAATTTTGTTTTTATGTTTGTTGCAAGTCATGACACATCTGCTACTCTCATGACATTGATGATATGGAAGTTATCTAGAGATCAAGAGGTTTATAACAAAGTTTTAGAAGAACAAATGGAGATTTTAAAGCAAAGGAATGAAAATGAAGAGAGGTTAACATGGGGAGAGATACAAAAGATGAAATACACATGGAGAGTTGCTCAAGAATTGATGAGGATGATCCCTCCTTTGTTTGGTGGATTTAGGAAAGCACTTAAAGATACTAGTTACCTAGGATATGACATACCAAAAGGATGGCAGGTATATTGGGCATCATGTGGAACACATATGGACAAAGATATATTCGAGAATCCAGACAAGTTTGATCCATCTCGTTTTGAAAATCAAACAAAGTCAATCCCACCCTTTTCTTACCTTCCATTTGGTGCAGGGTCTCATAATTGCATAGGAAATGAGTTTGCTAGGGTTCAGACATTAACTACCATTCACAATTTTGTGAAGTTGTACGAATGGTCTAAATTGAATCCAAAGGAAACTCTTACTCGTCAACCAATGCCTTATCCATCATTGGGCCTTCCAATTAAGATCAAACCAAGATGTAATATGTCTTAA 1449 0.3609 MVKDIPFIALCILTLSLAFLLKKLLSKSQTKNVPKGSLGYPIIGETLGFLRAQRQDKGYEWLQERVSKYGSVFKTSLMGSPTVIIIGQQGNKFILGSSDDVISAKKPITLQKILGKQSLSELVGSSRHRLVKGELLKFLKPECLQNYVKKMDELVHTTLLKELKGNKTIQVVRLMKKLAYDMTSSILFDIDQHTREILFDDFTTSFKAIHSLPINLPGSSFWRGQKARARIVEMILPIMNERRQELSKGVLSSTNDMLSCLLAIRDENDKPLNDDLITDNFVFMFVASHDTSATLMTLMIWKLSRDQEVYNKVLEEQMEILKQRNENEERLTWGEIQKMKYTWRVAQELMRMIPPLFGGFRKALKDTSYLGYDIPKGWQVYWASCGTHMDKDIFENPDKFDPSRFENQTKSIPPFSYLPFGAGSHNCIGNEFARVQTLTTIHNFVKLYEWSKLNPKETLTRQPMPYPSLGLPIKIKPRCNMS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04856 482 PANTHER CYTOCHROME P450 26 31 467 - -
Vivi3g04856 482 CDD CYP90-like 65 477 - -
Vivi3g04856 482 Gene3D Cytochrome P450 23 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 PRINTS E-class P450 group IV signature 411 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 Coils Coil 311 331 - -
Vivi3g04856 482 FunFam Taxadiene 5-alpha hydroxylase 24 478 - -
Vivi3g04856 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Vivi3g04856 482 Pfam Cytochrome P450 34 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04856 482 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04856 Vivi-Chr3 92178219 92181765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04856 4 482 Cytochrome P450 AT4G19230 33.265 4.80e-75 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04856 - - gmx:100790209 753.051