Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04852 ATGATGAGATACACTCCTGCTTTCCTCTCGTCACTCCCTCAGTCCTTTTGGCCCCTTTCACTTGTTATATTTTTTATCTTTATGATTATTAAATCCCTAAGTTATCACTTGATGAATATAAATCCAAAAATACCAAAATTGCCACCAGGTCCCAAACCATGGCCTATAGTTGGCAATCTTCCTGAAATGCTTACAAGCAAATCTCCAACTGAGTGGATACACAAAACTATGGAAGAATTCAACACTGATATTGCATGTATTCGCCTAGGAAATGTCCATGTTATCCCTGTCACTTGTCCCACCATTGCTCGTGAATTCTTGAGAAAATATGATGCTGATTTTTCATCAAGACCAACAAGCATGGCAACTGATATCATCTCCAATGGACAGTTAACCACAATATTTGCACCCATTGGCGAACAATGGAGAAAGATGAAGAGAATCGTTGCTAATGATTTGTTCTCACCACTCAGACATCAATGGCTTCAAGACAAAAGAAACGAAGAAGCCGATAATCTTATGTTTTATGTGTACAACAAATGCAAGAATGGTGACCTTGTGAATGTTAGAATTGCAACACAACATTATTGTGGAAATGTGTATCGAAAATATTTTTTTAATACGAGATATTTCGGAAATGGAATGAAAGATGGAGGGCCCGGTGTTGAAGAAAAAGAACATGTTGATGCTGTTTTTGATTTGCTTGATCATGTTTATGCTTTCTCTGCGTCTGATTATATCCCATGGTTGAGGTTACTTGATTTAGATGGACATAAAGGAAAGGTAACAAATGCAATAAAGATAATGAACAAGTATCATGATTGTCTCATTGATGAGAGGATCAAACAATGGAATGATGGATCAAAGAATGTTGAAGAGGACTTGCTAGATGTTTTGATTTCATTAAAAGATGTCAATAATAATCCGTTATTGACAACTAAGGAAATCAAGGCACAAATCATTGAATTAATGATGGCAATGGTAGACAATCCTTCAAATGCTGTTGAATGGACATTGGCTGAAATGTTAAATCAACATGTTCTAATGGAAAAAGCTATAGAAGAATTGGACAATATAGTTGGAAAAGATAGGTTGGTCCAAGAAATTGATATTCCTAAACTCAAATTCTTGAAGGCTTGTGCAAGAGAAGCTTTACGCCTCCATCCCATAGCGACTTTCAATGTTCCCCATGTCTCAATGAATGATACAATAATTGGAAATTTCTTGATACCAAAGGGTAGCCATGTATTGCTTGGAAGAAGTGGACTTGGAAAAAACCCAAAAGTTTGGAGTGAACCTTACAAATTTCAACCAGAACGCCATTTGAAGAATAATAGGTTTGATATATCTTTGACAGAGCCAAATTTGAAGTTTATATCTTTTAGTACAGGAAGGCGTGGTTGCCCTGGTGTCATGCTTGGCACCACAATGACTATTCTTTTATTAGCTAGGTTGCTCCATGGCTTCACTTGGAGTTCACATCCTAATATATCAAAAATCAATCTTGTCGAGTCCAAAGGTGGTATGCTTCTTCATGATCCACTAACGATTGTAGCAAAGCCTCGATTAAAAATAGATTTGTATAGTTTTTGA 1593 0.3641 MMRYTPAFLSSLPQSFWPLSLVIFFIFMIIKSLSYHLMNINPKIPKLPPGPKPWPIVGNLPEMLTSKSPTEWIHKTMEEFNTDIACIRLGNVHVIPVTCPTIAREFLRKYDADFSSRPTSMATDIISNGQLTTIFAPIGEQWRKMKRIVANDLFSPLRHQWLQDKRNEEADNLMFYVYNKCKNGDLVNVRIATQHYCGNVYRKYFFNTRYFGNGMKDGGPGVEEKEHVDAVFDLLDHVYAFSASDYIPWLRLLDLDGHKGKVTNAIKIMNKYHDCLIDERIKQWNDGSKNVEEDLLDVLISLKDVNNNPLLTTKEIKAQIIELMMAMVDNPSNAVEWTLAEMLNQHVLMEKAIEELDNIVGKDRLVQEIDIPKLKFLKACAREALRLHPIATFNVPHVSMNDTIIGNFLIPKGSHVLLGRSGLGKNPKVWSEPYKFQPERHLKNNRFDISLTEPNLKFISFSTGRRGCPGVMLGTTMTILLLARLLHGFTWSSHPNISKINLVESKGGMLLHDPLTIVAKPRLKIDLYSF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04852 530 Pfam Cytochrome P450 48 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Vivi3g04852 530 SUPERFAMILY Cytochrome P450 48 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 FunFam Cytochrome P450 9 40 526 - -
Vivi3g04852 530 Gene3D Cytochrome P450 43 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04852 530 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 22 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04852 Vivi-Chr3 91854383 91857432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04852 4 528 Cytochrome P450 AT4G39950 50.951 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04852 - K12153 gmx:100809902 719.153