Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04846 ATGGAAAAGGCCAACGTTGTTTTGTTGGATTTTTGGCCAAGCGTGTATGCAATGAGAGTAAAAATCGCGTTAGAAGAGAAGGGAGTCTCATATGAGTGTAGACAAGAAGATTTTCAAGCTAAAAGCTCTCTTCTTTTAGAGATGAACCCGGTTTACCAAAAGATCCCGGTTTTGATTCATAATGGAAAACCCATATGTGAATCACTCAACATTGTTCAGTATATTGATGAGGTTTGGAATCACAAACCTTCTCTTTTACCCTCTGATCCTTACAACCGATCACAAGCCAAGTTTTGGGGAGATTACATCGACAAACATGTATATAGCATTAGAAGGAAGATATGGTTAGGAAAGGGTAAAGAACAAGAAGAAAGTAAAAAAAAGCTTATAGAATGTTTGAAGACTTTAGAAGATGAGCTTGGAGATAAGCCATATTTTGGAGGAGATGAGTTTGGATATGTTGATGTGGCTCTTATTCCCTTCACAAGTTGGTTTTACACATATGAAACTTATGGGAAACTAAATATGGAGGAAGAGTGTCCTAAGCTTGAGGTTTGGGCCAAAAGGTGTATGGAAAAAGAGAGTGTGGCAAAGTCACTCCCTCACCCTCACAAAATCTATGCTTTTGCAACCACAAGATTTAATGGGAACCGGTGA 657 0.3851 MEKANVVLLDFWPSVYAMRVKIALEEKGVSYECRQEDFQAKSSLLLEMNPVYQKIPVLIHNGKPICESLNIVQYIDEVWNHKPSLLPSDPYNRSQAKFWGDYIDKHVYSIRRKIWLGKGKEQEESKKKLIECLKTLEDELGDKPYFGGDEFGYVDVALIPFTSWFYTYETYGKLNMEEECPKLEVWAKRCMEKESVAKSLPHPHKIYAFATTRFNGNR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04846 218 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vivi3g04846 218 Gene3D - 89 215 - -
Vivi3g04846 218 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Vivi3g04846 218 FunFam Glutathione S-transferase U20 89 215 - -
Vivi3g04846 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 208 IPR045073 -
Vivi3g04846 218 Coils Coil 218 218 - -
Vivi3g04846 218 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
Vivi3g04846 218 Gene3D Glutaredoxin 2 88 - -
Vivi3g04846 218 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Vivi3g04846 218 CDD GST_N_Tau 6 79 - -
Vivi3g04846 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vivi3g04846 218 SFLD Main.3: Omega- and Tau-like 1 214 IPR045073 -
Vivi3g04846 218 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Vivi3g04846 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 214 IPR010987 -
Vivi3g04846 218 SFLD Main (cytGST) 1 214 - -
Vivi3g04846 218 FunFam Tau class glutathione S-transferase 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04846 Vivi-Chr3 91598602 91599659 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04846 6 211 Glutathione S-transferase Gene Family AT1G78380 61.650 7.31e-98 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04846 K00799 - gmx:100527221 358.607