Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04837 ATGATGAGTTACATTTGTAGCTTCCTTTTGTTACTCCCTCAATCCTTTTGTCCTCTTTTCCTTGTTATGTTTTTATGCTTTATGTCTATCAAAACCCTAAGATATCATTTGATGTGTATGAAATCAAAAATACCAAAATTGCCCCCAGGTCCCAAACCATGGCCTATAGTTGGCAATCTTCCTGAAATGCTTGCAAGCGAATCTCCAACTAGGTGGATACACAAAATAATGGAAGAAATGAACACTGAAATAGCATGTATCCGCCTAGGAAATGTCCATGTTATCCCTATTACATGTCCCACCATTGCTCTTGAATTCTTAAGAAAACATGATGCTGAGTTTGCATCAAGACCAATATCCATGTCCACTGACATCATCAGCAACGGTTTCTTGACAACAGCTGTTACACCCTTTGGAGAACAATGGAAGAAAATGAAGAAAATATTCGTCAACGAACTATTCTCCCCCCACAAACATCAATGGCTCACAAACAAAAGAAATGAAGAAGCTGATAACCTTATGTTTTATGTCTACAACCAATGCAAAAATGTGAATGATAATGATCTTGTGAATGTTAGGAACATCGCGCGACATTATTGTTGTAATTTGATGAGGAAATTGGTTTTTAACACAAGGTATTTCGGAGAAGGTAGGAATGATGGAGGTCCTGGTTTGGAGGAAGTTGAACATGTAGATGCTATTTTCACATTGCTTAGGTATGTTTTTGCTTTTTGTGTTTCGGATTATATGCCATCGTTGAGAGGACTTGACATCGATGGACACGAGAGAAAGGTGAAGGATGCTATGAGTATTGTGAACAAGTATAATGATCCAATCATTGAAAAGAGAATTGAAAAATGGAGAAAAGATGGATCGAAAACTAGTGCTGATGTAGAGGACATACTCGATATTCTAATCACTCTCAAAGACGTGAACAATGAACCATTATTGACAACGGAGGAAATCAAGGCTCAAGCTCTAGAACTCGTGTTGGGAGGAGTGGACAATCCATCGCATGCAGCTGAATTTGCAATATCAGAAATGATAAATCAGCCCGAGTTACTTCAACGAGCGACCCAAGAATTGGACAATATCGTAGGCAAACAAAGACTAGTCCAAGAATCGGACATTCCAAATCTCAACTACGTTAAAGCTTGTGCGAAGGAAGCTTTTCGTCTTCATCCCATTACAATTTTCAATCCTCCCCATGTCTCAATGGAGAACATAATGGTTGGTGATTACATGATCCCGAAAGGTAGCCATGTGATTCTAAGCAAACAAGGACTCGGACGAAATCCAAAAGTTTGGAATGAACCTCGCAAATTTAAACCAGAACGCCATCTAAAAAGCGATGGATCTATGGTAGTTTTAGGGGAACCAGATTTGAAGTTGATATCGTTTAGTACCGGAAGACGTGCTTGTCCTGGAATTGTAATTGGAACCACAATGACTGTGATGTTATTGGGTAGGTTGCTCCATGGCTTCAAATGGAGTGGACCTCCTAATGTATCAACTGTGGATCTTCTTAAGTATTCTAATGGTGATAGATACATTGGAGGGCCACTTGTAGCAATAGCAGAGCCAAGATTGGCAGCAGAATTGTATCATCCATGA 1614 0.3941 MMSYICSFLLLLPQSFCPLFLVMFLCFMSIKTLRYHLMCMKSKIPKLPPGPKPWPIVGNLPEMLASESPTRWIHKIMEEMNTEIACIRLGNVHVIPITCPTIALEFLRKHDAEFASRPISMSTDIISNGFLTTAVTPFGEQWKKMKKIFVNELFSPHKHQWLTNKRNEEADNLMFYVYNQCKNVNDNDLVNVRNIARHYCCNLMRKLVFNTRYFGEGRNDGGPGLEEVEHVDAIFTLLRYVFAFCVSDYMPSLRGLDIDGHERKVKDAMSIVNKYNDPIIEKRIEKWRKDGSKTSADVEDILDILITLKDVNNEPLLTTEEIKAQALELVLGGVDNPSHAAEFAISEMINQPELLQRATQELDNIVGKQRLVQESDIPNLNYVKACAKEAFRLHPITIFNPPHVSMENIMVGDYMIPKGSHVILSKQGLGRNPKVWNEPRKFKPERHLKSDGSMVVLGEPDLKLISFSTGRRACPGIVIGTTMTVMLLGRLLHGFKWSGPPNVSTVDLLKYSNGDRYIGGPLVAIAEPRLAAELYHP 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04837 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Vivi3g04837 537 SUPERFAMILY Cytochrome P450 48 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 FunFam Cytochrome P450 9 40 533 - -
Vivi3g04837 537 Gene3D Cytochrome P450 37 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04837 537 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 535 - -
Vivi3g04837 537 Pfam Cytochrome P450 48 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04837 Vivi-Chr3 91361343 91363119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04837 1 535 Cytochrome P450 AT2G22330 49.813 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04837 - K14984 gmx:100787378 724.931