Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04835 ATGGCAGTAACAGTTAGCTTTGAAAGATATGCAAGAGGAACAGACAATGTCAGAGAAGCTTGCATAGTAACTAAGTATCAAAACCTTTGTATGCGCTCACTAGCACCGTTCTCAAACAGTGCTGGACGAAGCCCTGGTAAGTGGACGAGGGCAGGGGTGTCGGTTACAATCGGAGAGGCTAAGAATGTTCAAGCTTATCTGTCAAGCTTCAAGAGGCGCGAGCATTTAAGAGGAAGAAATAAAGTTGCACTTTTAGATTGTATTGAAACTTTTGCGGATGCCATTGACGATCTTCATAGGTCACTGAATGTGCTCAGAAGGCTTAGCAGAAGCACATTTGGCACCCAAATGGGGGACCTTAATACATGGTTAAGTTCAGCCCTCACAAATGAATATACTTGCCTTGATGGGTTTCAAGTCAAAAGTGATAAGAAAATTAAATCGCTACAAAATAAGGTTCGCAAAGTTTATTATGTAACCAGTAATACTCTAGCTCTTGTCAACAAGCATGCCACTACAGGTCTAGGAAGCATTTTTGATCCATAG 546 0.4158 MAVTVSFERYARGTDNVREACIVTKYQNLCMRSLAPFSNSAGRSPGKWTRAGVSVTIGEAKNVQAYLSSFKRREHLRGRNKVALLDCIETFADAIDDLHRSLNVLRRLSRSTFGTQMGDLNTWLSSALTNEYTCLDGFQVKSDKKIKSLQNKVRKVYYVTSNTLALVNKHATTGLGSIFDP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04835 181 Pfam Plant invertase/pectin methylesterase inhibitor 16 166 IPR006501 GO:0004857
Vivi3g04835 181 NCBIfam pectinesterase inhibitor domain 10 169 IPR006501 GO:0004857
Vivi3g04835 181 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 166 - -
Vivi3g04835 181 SMART PMEI_2 12 166 IPR006501 GO:0004857
Vivi3g04835 181 CDD PMEI-like_3 20 172 - -
Vivi3g04835 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 12 170 IPR035513 -
Vivi3g04835 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 15 169 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04835 Vivi-Chr3 91167337 91168750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04835 17 167 Carbohydrate Esterase AT3G14310 33.548 9.96e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04835 - - gmx:100791264 213.772