Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04805 ATGGATGAAATTACCACCCTTTGTGGAATTGATGCATGTGGCATAATCTATGATGAAAATATGTCACATCCAACAATTTGGCCATCAATAGATACATTTCAAACATTGATGGACAGATTTAGAGCCCTTCCTGAATCCGAACAAAGAAAAGTGACGTTGGATCACGAGGGCTTATTGAAGATGACAATAGCGAAAGATCAAGAGAAATTAATGAAACAAAAGGACATCACCGAGAAGAAGGAAATGAATAATTTACTTGATCATTTTATCCGAACAGGTGAATTTGATGGAAATGATTTGAGCGAGAGTGATCTCGAAGATCTGTCGTTGCTTATTGATAGCAACCTTAAAGAACTCGAGTAG 363 0.3691 MDEITTLCGIDACGIIYDENMSHPTIWPSIDTFQTLMDRFRALPESEQRKVTLDHEGLLKMTIAKDQEKLMKQKDITEKKEMNNLLDHFIRTGEFDGNDLSESDLEDLSLLIDSNLKELE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04805 120 SUPERFAMILY SRF-like 3 60 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04805 Vivi-Chr3 90317507 90317945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04805 1 119 Type I MADS-box Gene Family AT5G48670 37.815 2.21e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04805 - - vvo:131636390 190.66