Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04803 ATGGTTGATGAAATAACCACGCTTTGTGGAGTTGAAGCTTGTGTTCTAATTTATGGCCCTTATGATCCTCAACTTGAGATCTGGCCATCACCACACGGAGTCGAAAAGGTTCTCTCGAAATTCAAGGAAATGCCTGAATTTTTGCAAAGCAAAAAAATGTTGAATCAAGAGACTTTCTTGAAACAAAGGGTTTTAAAGGTTAAAGAGCAACTAATCAAACAAATGAGAGACAATAGGGAGAAAGAGATGACCATGTACATGTTCGAATGTCTCTATGCTGGAAATATTGTGTCCAACAATACATTTAAGGCTGATTTGAATAATTTGTCATGTATGATTGACATGAATTTGAAACACATTGATAGAAGGTTGGATAACAATATTAATAGTCAAGTCGGATTCGAAATGCCACAACTGCCTCCCCAGGCATCAGCATCCCAGAATGGTCATGAAGATGAAGAAATTCTGTTTCGGAATGAAGTTAATCTTGAAAATGAATTTTGGTCAAATCTACTGCCTTAA 522 0.3659 MVDEITTLCGVEACVLIYGPYDPQLEIWPSPHGVEKVLSKFKEMPEFLQSKKMLNQETFLKQRVLKVKEQLIKQMRDNREKEMTMYMFECLYAGNIVSNNTFKADLNNLSCMIDMNLKHIDRRLDNNINSQVGFEMPQLPPQASASQNGHEDEEILFRNEVNLENEFWSNLLP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04803 173 Gene3D - 1 67 IPR036879 GO:0003677|GO:0046983
Vivi3g04803 173 SUPERFAMILY SRF-like 3 64 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04803 Vivi-Chr3 90251597 90252463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04803 2 149 Type I MADS-box Gene Family AT5G48670 45.946 5.53e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04803 - - vvo:131656318 356.681