Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04786 ATGACGAGTTTTCTAATTGATTACGCGAAGAAAAATGTGGAGAAATCGTTAGATGGAGTGCTGAAAGAACTACGTTATATATGTTGTTTCACTTGCATTGCTAAGGAATTTGAAGAAGAAAAAACTTGGTTGGAAGCGGAAAGAACAACTGTTGGGCAACGTGTTAAAGTTGCAAAAAGAAGAGGAGATGACGTTCAAGATAATGTTATTTTTTGGGAAGAAGAAGCTGATAAGATCATTCAAGAAGACACCAAAACAAATAAAAAATGCTTTTTTGGATTATGTCCTGATTGCATATGGCGATATAGAAGGGGAAAGGAATTGGCAAATAAGAAGGACCAAATAAAAAAACTTATGAAAACCGGAAAGGAACTTGGAATTGGACTCCCTGCCCCTCTTCCAGATGTTGACCGATATTCATCCCGACACTATATTTCTTTTAAAAGTAGAGAATCGAAATGTAAAGAGCTTTTGGATGCACTAAAAGATGACAACAATTATATAGTCGGTTTGCAAGGAATAGGCGGCACTGGAAAGACTACATTGGCCAAAGAAGTGGGTAAGAAACTTAAGCAATCCAAACAATTTACATACATTATTGATACAACAGTGTCATTTTCTCCAAATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGACTTTTGATGGATGTAGTGAATCAGACCGATCCAAAAAACTTTGGAAAGGATTAACCAGTGGTGAAAAAATTCTTCTAATATTGGATGATGTTTGGGGAGATATTGATTTTGAAGAAATAGGGATTCCCTATAGTGACAATCACAATGGTTGTAGAATTCTTGTAACCACACGCAATGTGTTGGTATGCAACAAATTAGAATGCAGTAAGACAATCAGATTGGAGTTCTTGTCTCAAGACGATGCATGGGAAATGTTCAAACGGCATGCTAGTCTAACTGAAATTTCATCTAAAAGTTTGCTCGACAAGGGTTTTAAAATTGCAAATGAATGCCAAGGATTACCAATTGCAATTGCTGTTATCGCAAGTAGTTTGAAGGGAAAACATCAGGTAGAATGGGATGTTGCCTTAAAATCCTTGAAGAAGCATGCACCAATACACGAAATTGATGATGATTTGGTTAAAATATATGAATGCTTGAAGTTTAGCTATGATAATATGAATGATGGAAAGTCCAAAAGACTATTCCTTTTGTGTTCTGTATTTCCAGAAGATGAAGAAATTCCTACTGAAAGGTTGATGAGACATGGCATAGGAGCAGGTCTTTTTGGGGAAAATTATGGCAACTACGATGATGCTCGAAGTCAAGTAGTTATATCAAAAAAAAAACTCCTAGATTCTTGTTTATTGTTGGAGGTCGATCAAGATAGAGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGATAGCAAAGAAAGAGATTCAAACAATAAAGTTGTATGATAAAAAACAAAAGGCAATGGTTGAAAGGGAGAAGAATATTAAATATTTGTTTTGCGAAGGAAAGCTAAAGGATGTGCTTTCTTGCAAGCTTGATAGTTCAAAGCTCCAGATTCTAATTGTCAGAATGCAGATGGATGGTGGTTTTCACGACGAGAAACATGAAGTTCCAAATTCATTTTTTGAAAATATTAGTGGCCTTCGCGTTTTTCACTTAATTAGTGATTTTTATCCACCAACTGTATCGTTACCTAAATCAATTCAATCGTTGAAAAATATTCGAGCTCTTCTTGTTAATGGTGTTGATTTGGGTGATATCTCTATTTTGGGAAATCTACAAAGTCTTGAGACACTTGATTTGGATTGGTGTAAAATTAATGAATTGCCAGAAGGACTGGCAAAACTACAGAAGCTTATATTGTTAAAACTGATAAATTGTGAAATAATAAGGAATAATCCATTTAAAGTGATTGAAGGATGCTCCTCACTAGAAGAGTTGTATTTCGTAGGCAGTTTTAATGATTATTGCCGAGAAATATCCTTACCAATGTTACAAAGATTTATATTGGATGATAGGAAGAGGTATGATGAGATTGGTTCTCTATCAAAATCTGTGTCTCTTGAATATCCAGAAGATGAACATTTACTATCTGAAAAACTACTGAAGGACTGTATACAAGTAGTAGAGGTTCTTAGACTAAAAAAAATCTGGTGGGAATGGGTAAATATAATACCTGAAATTGTTCCTATGGATCATGGTATGAATGATCTAGTCAGGCTTAAATTGAGTTGCATTTCACAACTTAAGTGTCTCATTGACACTAAGCATAATAATTCTCAAGTAACAACTGTCTTCTCCAAGTTAGTGGTACTAAAATTGGAAGAAATGGAAAGTTTGAGAGAATTGTGCAATGGTCCCATTTCCTTTGATTCTCTGAAGAGTTTAGAGAAACTGACCATCGAGGGATGCAATCAATTGCAAAGCTTATTCGCGTGCAACCTAAACCTCTTCAATTTAAAGAGCTTGTCACTGATACGATGTCCGATGTTGATCTTCTCCCTATTTGAACTGACCACGTCTCGTAGCCTAGTGTCATTGGAGGAATTGGTAATAATTGACTGCAGGCAACTTGAATACATAATAATAGATGAAAGAAAAGTGAAAGAATCGAGAAGAAAAACAGTTCTTGATGATGATGATAATAATGATCGCAAGAGGAGTCAAGACTCAATATTTCCAAAACTTAAAGATCTTCATATTTATGAGTGTCCTGGATTAAAATATATATTCCCGTTTCTCTCTGTTCAGGATCTTCCATCACTAGAAACTATCATAATATATGATTGTGAGAAGCTGCAACACATATTTGGCCATAATTTAATAAATAATTATCTAAAATGTGATGATGTTATCACGTCTTCTCCCATTTCTAGAAACGCTTCCAAACCAAAACAACAATCAGATCCTATGAAATGCAGTCCCTTTTCATGGACCAATATATGTTGCTTTGGTAAAAAGTCAATGACTACTGCAAAGACTGAAATCCCATTGGTTTCTGAAGATCAACACCAGCACATAGTAATAGACAAGGGAGATCATCAAAGTGAATTTCACCTTCAGCTTCCAGCAATGAAATGTCTCCATCTTAGGAATCTGCCATGTTTAGTCGCCACGTGTCCCAAACTTTATCGCACAACCTTTCCACATTTGGAAGAACTTGATGTTCATAACTGCTTGCAATTTGCTATAAAATCTATTGGTGATCTCACAATTCATTCGGCTTCACAATCTCTGGATTCTACAATCAAGAAGGATCTGACTAAGGAGACTACGAGTTTTTTGGTTGGTCCAAAAAATTCATTTTCCCTCAGTCAACTTTCACAGATAAAAATATTCCGATGCGAAAAATTGGAAATCATGTTTTCCACATCAATATTAAGATGCCTACCGGAATTGTTTTTTCTAAGAATAGAAGAATGCAAAGAGTTGAAGCATATTATTGAAGATGATTTGGAGAATGAAAAATCCATAAATTTTCAGTCTACAAACACATACTTCCCAAAGCTAGAGATACTTGTTGTAGTAAACTGCAACAAGCTCAAATGTGTTTTTCAGTCCTCAGTATGTAAAGAGCTTCCAAAGTTAAAGGTTCTGATTATTAAAGAAGCATATGAGCTACAAGAAATATTCAAAACTGAAGGTGATGAACAGAAACTCGGGATTCCAAATCTGGAAATGGTAGCATTTATCAATCTTCCAAACCTCTGCCATGCTCAGGGAATGCACTTTCAGGCTGTAGAAACTCGTCTTGTACATAACTGTCATAAACTCTCTTTGGCTTCAGCATCAAAATTGGATTACATTTCTGAAATTATTGATTATCTTTACAACATAGATGCTAGTATATATTGGGAATTGCACACGCTACTACAACAATTAGTAAATGTGTGCGATAGCCATGATACTTGTAATGGAAAACCAAGTTCAGAAAATACTCAAGAATTTGCAATTGGGGTTCAAGCGGAAGCATCATCAGAATCAGGAAGTAGATTGACTTCTTCACAGCCACAGGTGTTGATGAATGAACATTCAATGGATCAACAACATTCACTTGGAGAAACTGATACTACCATCAAACCTCAGGAAGATGGTGATTTCCAAATAGCGGCGACCTCTTTGTTCAGTCCCACAACAGAAACCAATGATGAAGTTTGTCTAAATGGTGACGCTTTCAAGAAAGTAAGCTCAAATATTGAGGAACAATTTACTAACGATGATAAAATAATATTTTCCAAATCTAAACCCTCTCCTAGCATCTCATCTCCTTTTGCATCTCAGTTTCCATCAATTTCTTCTAAAGGTGACCCTTCTCAAAAAGTAGAGGAGTTAAGTTCTTTTTTGCCGATCACAAAGGAGCTTGAGCAACTAGTCTTGAAGAAGCATCTGGATTATGAGAACTCATTTTTGTTGACTGATTTCCTTTATAAACATCCTTCTGTTCTTTTAAAGGACAATTCACTTAGTAACAGATACAAGGGTTATGCCTACAACTGTCTGGCAGAGCTATTGAAATTCCTCCAAACCCATAGTGTGCTGGATGTGTTAGGTTCAAACCACTATGAATTTGTTGAATTATTGCAAGATGTGCGCAAATGTGGTTTTGATAAGGATTGGTTGGATGGTATCGAAAGGCGCATTTTGTTTCCTAATCTGAAGCATCAATTGACATCATCTGAAGCTGTTTTGGAGAGTATCATTCAACAGAAAAGGGTATTAAGCGCCCCTATTGGCTATTAG 4752 0.3577 MTSFLIDYAKKNVEKSLDGVLKELRYICCFTCIAKEFEEEKTWLEAERTTVGQRVKVAKRRGDDVQDNVIFWEEEADKIIQEDTKTNKKCFFGLCPDCIWRYRRGKELANKKDQIKKLMKTGKELGIGLPAPLPDVDRYSSRHYISFKSRESKCKELLDALKDDNNYIVGLQGIGGTGKTTLAKEVGKKLKQSKQFTYIIDTTVSFSPNIKKIQDDIAGPLGLTFDGCSESDRSKKLWKGLTSGEKILLILDDVWGDIDFEEIGIPYSDNHNGCRILVTTRNVLVCNKLECSKTIRLEFLSQDDAWEMFKRHASLTEISSKSLLDKGFKIANECQGLPIAIAVIASSLKGKHQVEWDVALKSLKKHAPIHEIDDDLVKIYECLKFSYDNMNDGKSKRLFLLCSVFPEDEEIPTERLMRHGIGAGLFGENYGNYDDARSQVVISKKKLLDSCLLLEVDQDRVKMHDLVRDAAQWIAKKEIQTIKLYDKKQKAMVEREKNIKYLFCEGKLKDVLSCKLDSSKLQILIVRMQMDGGFHDEKHEVPNSFFENISGLRVFHLISDFYPPTVSLPKSIQSLKNIRALLVNGVDLGDISILGNLQSLETLDLDWCKINELPEGLAKLQKLILLKLINCEIIRNNPFKVIEGCSSLEELYFVGSFNDYCREISLPMLQRFILDDRKRYDEIGSLSKSVSLEYPEDEHLLSEKLLKDCIQVVEVLRLKKIWWEWVNIIPEIVPMDHGMNDLVRLKLSCISQLKCLIDTKHNNSQVTTVFSKLVVLKLEEMESLRELCNGPISFDSLKSLEKLTIEGCNQLQSLFACNLNLFNLKSLSLIRCPMLIFSLFELTTSRSLVSLEELVIIDCRQLEYIIIDERKVKESRRKTVLDDDDNNDRKRSQDSIFPKLKDLHIYECPGLKYIFPFLSVQDLPSLETIIIYDCEKLQHIFGHNLINNYLKCDDVITSSPISRNASKPKQQSDPMKCSPFSWTNICCFGKKSMTTAKTEIPLVSEDQHQHIVIDKGDHQSEFHLQLPAMKCLHLRNLPCLVATCPKLYRTTFPHLEELDVHNCLQFAIKSIGDLTIHSASQSLDSTIKKDLTKETTSFLVGPKNSFSLSQLSQIKIFRCEKLEIMFSTSILRCLPELFFLRIEECKELKHIIEDDLENEKSINFQSTNTYFPKLEILVVVNCNKLKCVFQSSVCKELPKLKVLIIKEAYELQEIFKTEGDEQKLGIPNLEMVAFINLPNLCHAQGMHFQAVETRLVHNCHKLSLASASKLDYISEIIDYLYNIDASIYWELHTLLQQLVNVCDSHDTCNGKPSSENTQEFAIGVQAEASSESGSRLTSSQPQVLMNEHSMDQQHSLGETDTTIKPQEDGDFQIAATSLFSPTTETNDEVCLNGDAFKKVSSNIEEQFTNDDKIIFSKSKPSPSISSPFASQFPSISSKGDPSQKVEELSSFLPITKELEQLVLKKHLDYENSFLLTDFLYKHPSVLLKDNSLSNRYKGYAYNCLAELLKFLQTHSVLDVLGSNHYEFVELLQDVRKCGFDKDWLDGIERRILFPNLKHQLTSSEAVLESIIQQKRVLSAPIGY 1583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04786 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 402 IPR027417 -
Vivi3g04786 1583 Pfam NB-ARC domain 154 389 IPR002182 GO:0043531
Vivi3g04786 1583 SUPERFAMILY L domain-like 462 941 - -
Vivi3g04786 1583 Gene3D Ribonuclease Inhibitor 1025 1224 IPR032675 -
Vivi3g04786 1583 Gene3D Ribonuclease Inhibitor 820 952 IPR032675 -
Vivi3g04786 1583 MobiDBLite consensus disorder prediction 1418 1441 - -
Vivi3g04786 1583 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 957 - -
Vivi3g04786 1583 Gene3D - 136 296 IPR027417 -
Vivi3g04786 1583 Gene3D Ribonuclease Inhibitor 454 681 IPR032675 -
Vivi3g04786 1583 PRINTS Disease resistance protein signature 241 255 - -
Vivi3g04786 1583 PRINTS Disease resistance protein signature 168 183 - -
Vivi3g04786 1583 PRINTS Disease resistance protein signature 334 348 - -
Vivi3g04786 1583 PRINTS Disease resistance protein signature 595 611 - -
Vivi3g04786 1583 Gene3D - 299 391 IPR042197 -
Vivi3g04786 1583 SUPERFAMILY RNI-like 1023 1212 - -
Vivi3g04786 1583 FunFam Probable disease resistance protein At1g61300 135 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04786 Vivi-Chr3 89499349 89508381 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04786 169 854 WRKY Transcription Factor Family AT5G45050 22.440 2.73e-17 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04786 - - vvo:131642047 2333.91